CoxKM |
KM for Survival Traits in GWAS Data (calculate p-value) |
CoxKM_data |
This is survival data |
FbKM |
KM for Binary Traits in Familial GWAS Data (calculate p-value) |
FbKMO |
Optimal KM for Non-continuous Traits in Familial GWAS Data (calculate p-value) |
FbKMO_Null_Model |
Optimal KM for Binary Traits in Familial GWAS Data (fit null model) |
FbKM_charID |
This is binary family data with character IDs |
fbkm_c_covariates |
This is binary family data with character IDs |
fbkm_c_gene |
This is binary family data with character IDs |
fbkm_c_geneid |
This is binary family data with character IDs |
fbkm_c_weights |
This is binary family data with character IDs |
fbkm_c_y |
This is binary family data with character IDs |
FbKM_Null_Model |
KM for Binary Traits in Familial GWAS Data (fit null model) |
FbKM_numID |
This is binary family data numeric IDs |
fbkm_n_covariates |
This is binary family data numeric IDs |
fbkm_n_gene |
This is binary family data numeric IDs |
fbkm_n_geneid |
This is binary family data numeric IDs |
fbkm_n_weights |
This is binary family data numeric IDs |
fbkm_n_y |
This is binary family data numeric IDs |
FKM |
KM for continuous Traits in Familial GWAS Data (calculate p-value) |
FKMO |
Optimal KM for continuous Traits in Familial GWAS Data (calculate p-value) |
FKMO_Null_Model |
Optimal KM for continuous Traits in Familial GWAS Data (fit null model) |
FKM_charID |
This is continuous family data with character IDs |
fkm_c_covariates |
This is continuous family data with character IDs |
fkm_c_gene |
This is continuous family data with character IDs |
fkm_c_geneid |
This is continuous family data with character IDs |
fkm_c_weights |
This is continuous family data with character IDs |
fkm_c_y |
This is continuous family data with character IDs |
FKM_Null_Model |
KM for continuous Traits in Familial GWAS Data (fit null model) |
FKM_numID |
This is continuous family data numeric IDs |
fkm_n_covariates |
This is continuous family data numeric IDs |
fkm_n_gene |
This is continuous family data numeric IDs |
fkm_n_geneid |
This is continuous family data numeric IDs |
fkm_n_weights |
This is continuous family data numeric IDs |
fkm_n_y |
This is continuous family data numeric IDs |
LKM |
KM for Quantitative Traits in Longitudinal GWAS Data (calculate p-value) |
LKMO |
Optimal KM for Quantitative Traits in Longitudinal GWAS Data (calculate p-value) |
LKMO_Null_Model |
Optimal KM for Quantitative Traits in Longitudinal GWAS Data (fit null model) |
LKM_charID |
This is continuous longitudinal data with character IDs |
lkm_c_covariates |
This is continuous longitudinal data with character IDs |
lkm_c_gene |
This is continuous longitudinal data with character IDs |
lkm_c_gid |
This is continuous longitudinal data with character IDs |
lkm_c_weights |
This is continuous longitudinal data with character IDs |
lkm_c_y |
This is continuous longitudinal data with character IDs |
LKM_Int |
KM for Traits by Time Interaction in Longitudinal GWAS Data |
lkm_int_n_covariates |
This is continuous longitudinal data with numeric IDs |
lkm_int_n_gene |
This is continuous longitudinal data with numeric IDs |
lkm_int_n_gid |
This is continuous longitudinal data with numeric IDs |
lkm_int_n_weights |
This is continuous longitudinal data with numeric IDs |
lkm_int_n_y |
This is continuous longitudinal data with numeric IDs |
LKM_Null_Model |
KM for Quantitative Traits in Longitudinal GWAS Data (fit null model) |
LKM_numID |
This is continuous longitudinal data with numeric IDs |
LKM_numID_int |
This is continuous longitudinal data with numeric IDs |
lkm_n_covariates |
This is continuous longitudinal data with numeric IDs |
lkm_n_gene |
This is continuous longitudinal data with numeric IDs |
lkm_n_gid |
This is continuous longitudinal data with numeric IDs |
lkm_n_weights |
This is continuous longitudinal data with numeric IDs |
lkm_n_y |
This is continuous longitudinal data with numeric IDs |
MFKM |
KM for Quantitative Traits in Multivariate Family GWAS Data (calculate p-value) |
MFKMO |
Optimal KM for Quantitative Traits in Multivariate Family GWAS Data (calculate p-value) |
MFKMO_Null_Model |
Optimal KM for Quantitative Traits in Multivariate Family GWAS Data (fit null model) |
MFKM_charID |
This is continuous multivariate family data with character IDs |
mfkm_c_covariates |
This is continuous multivariate family data with character IDs |
mfkm_c_gene |
This is continuous multivariate family data with character IDs |
mfkm_c_geneid |
This is continuous multivariate family data with character IDs |
mfkm_c_weights |
This is continuous multivariate family data with character IDs |
mfkm_c_y |
This is continuous multivariate family data with character IDs |
MFKM_Null_Model |
KM for Quantitative Traits in Multivariate Family GWAS Data (fit null model) |
MFKM_numID |
This is continuous multivariate family data with numeric IDs |
mfkm_n_covariates |
This is continuous multivariate family data with numeric IDs |
mfkm_n_gene |
This is continuous multivariate family data with numeric IDs |
mfkm_n_geneid |
This is continuous multivariate family data with numeric IDs |
mfkm_n_weights |
This is continuous multivariate family data with numeric IDs |
mfkm_n_y |
This is continuous multivariate family data with numeric IDs |
MKM |
KM for Quantitative Traits in Multivariate GWAS Data (calculate p-value) |
MKMO |
Optimal KM for Quantitative Traits in Multivariate GWAS Data (calculate p-value) |
MKMO_Null_Model |
Optimal KM for Multiple Quantitative Traits in GWAS Data (fit null model) |
MKM_charID |
This is continuous multivariate data with character IDs |
mkm_c_covariates |
This is continuous multivariate data with character IDs |
mkm_c_gene |
This is continuous multivariate data with character IDs |
mkm_c_geneid |
This is continuous multivariate data with character IDs |
mkm_c_ph |
This is continuous multivariate data with character IDs |
mkm_c_weights |
This is continuous multivariate data with character IDs |
MKM_Null_Model |
KM for Multiple Quantitative Traits in GWAS Data (fit null model) |
MKM_numID |
This is continuous multivariate data with numeric IDs |
mkm_n_covariates |
This is continuous multivariate data with numeric IDs |
mkm_n_gene |
This is continuous multivariate data with numeric IDs |
mkm_n_geneid |
This is continuous multivariate data with numeric IDs |
mkm_n_ph |
This is continuous multivariate data with numeric IDs |
mkm_n_weights |
This is continuous multivariate data with numeric IDs |
pheno1 |
This is survival data |
prepCoxKM |
KM for Survival Traits in GWAS Data (fit null model) |
SNPInfo |
This is survival data |
Z1 |
This is survival data |