Cosegregation Analysis and Pedigree Simulation


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Documentation for package ‘CoSeg’ version 0.38

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CoSeg-package Cosegregation Analysis and Pedigree Simulation
AddAffectedToTree Add affection status to a given tree
AddAffectedToTrees Add affection status to a given tree
BRCA1Frequencies.df BRCA1 cancer incidence data frame
BRCA2Frequencies.df BRCA2 cancer incidence data frame
CalculateLikelihoodRatio A function to calculate the likelihood ratio
ChinaDemographics.df Chinese Demographics Data Frame
CoSeg Cosegregation Analysis and Pedigree Simulation
FormatWebToCoSeg Plots a tree/pedigree
MakeAffectedTrees Make affected trees
MakeTree Make a tree
MakeTrees Make a tree
MLH1Frequencies.df Lynch Syndrome cancer incidence data frame
PlotPedigree Plots a tree/pedigree
RankMembers A function to calculate the likelihood ratio
USDemographics.df United States Demographics Data Frame