Last updated on 2022-08-15 08:49:58 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.2 | 2.79 | 43.82 | 46.61 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.2 | 1.98 | 32.31 | 34.29 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.3.2 | 64.00 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.2 | 63.15 | NOTE | |||
| r-devel-windows-x86_64 | 0.3.2 | 27.00 | 69.00 | 96.00 | OK | |
| r-patched-linux-x86_64 | 0.3.2 | 3.35 | 39.84 | 43.19 | OK | |
| r-release-linux-x86_64 | 0.3.2 | 2.97 | 40.86 | 43.83 | OK | |
| r-release-macos-arm64 | 0.3.2 | 60.00 | NOTE | |||
| r-release-macos-x86_64 | 0.3.2 | 55.00 | NOTE | |||
| r-release-windows-x86_64 | 0.3.2 | 19.00 | 80.00 | 99.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.2 | 46.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 0.3.2 | 50.00 | NOTE | |||
| r-oldrel-windows-ix86+x86_64 | 0.3.2 | 8.00 | 52.00 | 60.00 | ERROR |
Version: 0.3.2
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘tibble’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.3.2
Check: tests
Result: ERROR
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(IDConverter)
>
> test_check("IDConverter")
trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
trying URL 'https://zenodo.org/record/6342397/files/tcga.rda'
[ FAIL 3 | WARN 6 | SKIP 0 | PASS 2 ]
== Failed tests ================================================================
-- Error (test-roxytest-testexamples-convert_icgc.R:8:3): Function convert_icgc() @ L25 --
Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
Backtrace:
x
1. \-IDConverter::convert_icgc("SP29019") at test-roxytest-testexamples-convert_icgc.R:8:2
2. \-IDConverter:::convert(dt, x, from, to, multiple)
-- Error (test-roxytest-testexamples-convert_pcawg.R:8:3): Function convert_pcawg() @ L38 --
Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
Backtrace:
x
1. \-IDConverter::convert_pcawg("SP1677") at test-roxytest-testexamples-convert_pcawg.R:8:2
2. \-IDConverter:::convert(dt, x, from, to, multiple)
-- Error (test-roxytest-testexamples-convert_tcga.R:8:3): Function convert_tcga() @ L24 --
Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
Backtrace:
x
1. \-IDConverter::convert_tcga("TCGA-02-0001-10") at test-roxytest-testexamples-convert_tcga.R:8:2
2. \-IDConverter:::convert(dt, x, from, to, multiple)
[ FAIL 3 | WARN 6 | SKIP 0 | PASS 2 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64