Last updated on 2022-08-15 08:49:55 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 5.45 | 56.43 | 61.88 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 4.62 | 41.62 | 46.24 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 86.33 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 83.07 | OK | |||
| r-devel-windows-x86_64 | 0.1.0 | 24.00 | 86.00 | 110.00 | OK | |
| r-patched-linux-x86_64 | 0.1.0 | 3.67 | 52.13 | 55.80 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 3.58 | 52.31 | 55.89 | OK | |
| r-release-macos-arm64 | 0.1.0 | 22.00 | OK | |||
| r-release-macos-x86_64 | 0.1.0 | 49.00 | OK | |||
| r-release-windows-x86_64 | 0.1.0 | 12.00 | 82.00 | 94.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | 25.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.1.0 | 44.00 | OK | |||
| r-oldrel-windows-ix86+x86_64 | 0.1.0 | 18.00 | 69.00 | 87.00 | ERROR |
Version: 0.1.0
Check: tests
Result: ERROR
Running 'testthat.R' [4s/5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(edwards97)
>
> test_check("edwards97")
[ FAIL 3 | WARN 6 | SKIP 0 | PASS 80 ]
== Failed tests ================================================================
-- Failure (test-fit.R:16:3): edwards_fit_optim works --------------------------
`expect_identical\(print\(fit\), fit\)` does not match "<edwards_fit_optim>".
Actual value: "<edwards_fit_optim>\\n Fit optimised for `fit_data_alum`\\n Coefficients:\\n x3 = 5\.48, x2 = -78\.3, x1 = 285, K1 = -0\.0896, K2 = 0\.362, b = 0\.046, root = -1\\n Performance:\\n r\\xb2 = 0\.959, RMSE = 1\.17 mg/L, number of finite observations = 534\\n Input data:\\n DOC dose pH UV254 \\n Min\. : 1\.800 Min\. :0\.00000 Min\. :4\.500 Min\. :0\.0260 \\n 1st Qu\.: 2\.900 1st Qu\.:0\.06734 1st Qu\.:6\.072 1st Qu\.:0\.0810 \\n Median : 4\.000 Median :0\.16835 Median :6\.590 Median :0\.1200 \\n Mean : 6\.595 Mean :0\.21998 Mean :6\.540 Mean :0\.1975 \\n 3rd Qu\.: 8\.600 3rd Qu\.:0\.32338 3rd Qu\.:7\.018 3rd Qu\.:0\.2060 \\n Max\. :26\.500 Max\. :1\.51515 Max\. :8\.830 Max\. :1\.3550 \\n NA's :383 \\n DOC_final Predictions Langmuir a Sorbable DOC \(%\)\\n Min\. : 0\.760 Min\. : 0\.6722 Min\. : 38\.09 Min\. : 76\.55 \\n 1st Qu\.: 2\.070 1st Qu\.: 2\.0755 1st Qu\.: 41\.23 1st Qu\.: 83\.73 \\n Median : 2\.690 Median : 2\.9651 Median : 50\.12 Median : 90\.68 \\n Mean : 3\.835 Mean : 4\.2566 Mean : 62\.41 Mean : 91\.75 \\n 3rd Qu\.: 4\.001 3rd Qu\.: 5\.1763 3rd Qu\.: 73\.00 3rd Qu\.: 96\.05 \\n Max\. :30\.500 Max\. :25\.5534 Max\. :196\.91 Max\. :115\.15 \\n NA's :420 NA's :383 "
Backtrace:
x
1. \-testthat::expect_output(expect_identical(print(fit), fit), "<edwards_fit_optim>") at test-fit.R:16:2
2. \-testthat::expect_match(...)
3. \-testthat:::expect_match_(...)
-- Failure (test-fit.R:38:3): edwards_fit_coefs() works with data --------------
`expect_identical\(print\(fit\), fit\)` does not match "<edwards_fit_coefs>".
Actual value: "<edwards_fit_coefs>\\n Fit with coefs `edwards_coefs\("Al"\)` validated using `fit_data_alum`\\n Coefficients:\\n x3 = 4\.91, x2 = -72\.2, x1 = 284, K1 = -0\.075, K2 = 0\.56, b = 0\.147, root = -1\\n Performance:\\n r\\xb2 = 0\.945, RMSE = 2\.27 mg/L, number of finite observations = 534\\n Input data:\\n DOC dose pH UV254 \\n Min\. : 1\.800 Min\. :0\.00000 Min\. :4\.500 Min\. :0\.0260 \\n 1st Qu\.: 2\.900 1st Qu\.:0\.06734 1st Qu\.:6\.072 1st Qu\.:0\.0810 \\n Median : 4\.000 Median :0\.16835 Median :6\.590 Median :0\.1200 \\n Mean : 6\.595 Mean :0\.21998 Mean :6\.540 Mean :0\.1975 \\n 3rd Qu\.: 8\.600 3rd Qu\.:0\.32338 3rd Qu\.:7\.018 3rd Qu\.:0\.2060 \\n Max\. :26\.500 Max\. :1\.51515 Max\. :8\.830 Max\. :1\.3550 \\n NA's :383 \\n DOC_final Predictions Langmuir a Sorbable DOC \(%\)\\n Min\. : 0\.760 Min\. : 0\.8567 Min\. :134\.1 Min\. :54\.67 \\n 1st Qu\.: 2\.070 1st Qu\.: 1\.4700 1st Qu\.:136\.8 1st Qu\.:60\.69 \\n Median : 2\.690 Median : 2\.1278 Median :144\.3 Median :66\.50 \\n Mean : 3\.835 Mean : 3\.0109 Mean :154\.4 Mean :67\.40 \\n 3rd Qu\.: 4\.001 3rd Qu\.: 3\.6562 3rd Qu\.:163\.6 3rd Qu\.:71\.00 \\n Max\. :30\.500 Max\. :22\.9771 Max\. :263\.4 Max\. :87\.00 \\n NA's :420 NA's :383 "
Backtrace:
x
1. \-testthat::expect_output(expect_identical(print(fit), fit), "<edwards_fit_coefs>") at test-fit.R:38:2
2. \-testthat::expect_match(...)
3. \-testthat:::expect_match_(...)
-- Failure (test-fit.R:51:3): edwards_fit_coefs() works without data -----------
`expect_identical\(print\(fit\), fit\)` does not match "<edwards_fit_coefs>".
Actual value: "<edwards_fit_coefs>\\n Fit with coefs `edwards_coefs\("Al"\)` validated using `edwards_data\("empty"\)`\\n Coefficients:\\n x3 = 4\.91, x2 = -72\.2, x1 = 284, K1 = -0\.075, K2 = 0\.56, b = 0\.147, root = -1\\n Performance:\\n r\\xb2 = NA, RMSE = NaN mg/L, number of finite observations = 0\\n Input data:\\n DOC dose pH UV254 DOC_final \\n Min\. : NA Min\. : NA Min\. : NA Min\. : NA Min\. : NA \\n 1st Qu\.: NA 1st Qu\.: NA 1st Qu\.: NA 1st Qu\.: NA 1st Qu\.: NA \\n Median : NA Median : NA Median : NA Median : NA Median : NA \\n Mean :NaN Mean :NaN Mean :NaN Mean :NaN Mean :NaN \\n 3rd Qu\.: NA 3rd Qu\.: NA 3rd Qu\.: NA 3rd Qu\.: NA 3rd Qu\.: NA \\n Max\. : NA Max\. : NA Max\. : NA Max\. : NA Max\. : NA \\n Predictions Langmuir a Sorbable DOC \(%\)\\n Min\. : NA Min\. : NA Min\. : NA \\n 1st Qu\.: NA 1st Qu\.: NA 1st Qu\.: NA \\n Median : NA Median : NA Median : NA \\n Mean :NaN Mean :NaN Mean :NaN \\n 3rd Qu\.: NA 3rd Qu\.: NA 3rd Qu\.: NA \\n Max\. : NA Max\. : NA Max\. : NA "
Backtrace:
x
1. \-testthat::expect_output(expect_identical(print(fit), fit), "<edwards_fit_coefs>") at test-fit.R:51:2
2. \-testthat::expect_match(...)
3. \-testthat:::expect_match_(...)
[ FAIL 3 | WARN 6 | SKIP 0 | PASS 80 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.0
Check: tests
Result: ERROR
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(edwards97)
>
> test_check("edwards97")
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 76 ]
== Failed tests ================================================================
-- Error (test-fit.R:16:3): edwards_fit_optim works ----------------------------
Error in `gsub(paste0("([\\", paste0(collapse = "\\", chars), "])"), "\\\\\\1",
x, perl = TRUE)`: input string 1 is invalid UTF-8
Backtrace:
x
1. \-testthat::expect_output(expect_identical(print(fit), fit), "<edwards_fit_optim>") at test-fit.R:16:2
2. \-testthat::expect_match(...)
3. \-testthat:::expect_match_(...)
4. +-base::paste0(...)
5. \-testthat (local) escape(encodeString(act$val))
6. \-base::gsub(...)
-- Error (test-fit.R:38:3): edwards_fit_coefs() works with data ----------------
Error in `gsub(paste0("([\\", paste0(collapse = "\\", chars), "])"), "\\\\\\1",
x, perl = TRUE)`: input string 1 is invalid UTF-8
Backtrace:
x
1. \-testthat::expect_output(expect_identical(print(fit), fit), "<edwards_fit_coefs>") at test-fit.R:38:2
2. \-testthat::expect_match(...)
3. \-testthat:::expect_match_(...)
4. +-base::paste0(...)
5. \-testthat (local) escape(encodeString(act$val))
6. \-base::gsub(...)
-- Error (test-fit.R:51:3): edwards_fit_coefs() works without data -------------
Error in `gsub(paste0("([\\", paste0(collapse = "\\", chars), "])"), "\\\\\\1",
x, perl = TRUE)`: input string 1 is invalid UTF-8
Backtrace:
x
1. \-testthat::expect_output(expect_identical(print(fit), fit), "<edwards_fit_coefs>") at test-fit.R:51:2
2. \-testthat::expect_match(...)
3. \-testthat:::expect_match_(...)
4. +-base::paste0(...)
5. \-testthat (local) escape(encodeString(act$val))
6. \-base::gsub(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 76 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64