Ghat: Quantifying Evolution and Selection on Complex Traits

Functions are provided for quantifying evolution and selection on complex traits. The package implements effective handling and analysis algorithms scaled for genome-wide data and calculates a composite statistic, denoted Ghat, which is used to test for selection on a trait. The package provides a number of simple examples for handling and analysing the genome data and visualising the output and results. Beissinger et al., (2018) <doi:10.1534/genetics.118.300857>.

Version:	0.1.0
Depends:	R (≥ 3.0.0)
Imports:	rrBLUP
Suggests:	knitr, rmarkdown
Published:	2019-08-02
Author:	Medhat Mahmoud [aut, cre], Ngoc-Thuy Ha [aut], Timothy Beissinger [aut]
Maintainer:	Medhat Mahmoud <medhat.mahmoud at gwdg.de>
BugReports:	https://github.com/Medhat86/Ghat/issues
License:	MIT + file LICENSE
URL:	https://www.genetics.org/content/209/1/321
NeedsCompilation:	no
CRAN checks:	Ghat results

Documentation:

Reference manual:

Ghat.pdf

Downloads:

Package source:	Ghat_0.1.0.tar.gz
Windows binaries:	r-devel: Ghat_0.1.0.zip, r-release: Ghat_0.1.0.zip, r-oldrel: Ghat_0.1.0.zip
macOS binaries:	r-release (arm64): Ghat_0.1.0.tgz, r-oldrel (arm64): Ghat_0.1.0.tgz, r-release (x86_64): Ghat_0.1.0.tgz, r-oldrel (x86_64): Ghat_0.1.0.tgz

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