Add contour plot to the function “plot3D” when argument type = “contour”;
Allow users to specify the values alpha, shape, size in the function “plot”;
Revise description of the package;
Update README file;
Allow users to specify the values (e.g., alpha, shape, size);
Fix Issue #2.
Fix Issue #4, #5, and #6.
Initialize Travis;
Add cran-comments.md file to record CRAN notes;
Fix errors and warnings when building PAsso locally and on Travis;
Fix diagnostic.plot documentation;
Clean up dependents to speed up loading of the PAsso;
Update “PAsso()” to support adjacent categories regression model by using vglm(acat());
Update “residuals()” to support acat in VGAM;
Remove useless dataset df_AdjCat; functions “gof”;
Rename attribute “boot_reps” as “draws”.
Add ‘diagnostic.plot’ to replace ‘check.model’ for the diagnostics of fitted models in PAsso object. ‘autoplot’ become internal S3 method.
S3 ‘diagnostic.plot’ method can deal with classes of PAsso, PAsso.test, resid, clm, glm, lrm, orm, polr.
Only keep one nes2016 dataset.
Change ‘resids’ function to a S3 method ‘residuals’, which is consistent with R core ‘stats’ package.
Conduct more test by ‘testthat’ to avoid bugs when methods are applied to different classes.
Replace ‘cor’ function by ‘pcaPP::cor.fk(X)’ to speed up the PAsso().
Finalize the S3 methods ‘summary.PAsso’ and ‘print.PAsso.test’ to provide clean results.
Rename functions: corr -> PAsso; corr.test -> test; ggpairs -> plot; checkmodel -> check.model.
Update print and summary functions for PAsso and test.
Add S3 function “plot3D” to draw 3D P-P plot.
Add nes2016_raw, nes2016_pre, nes2016_post, nes2016_prepost datasets.
Include nes2016.clean() function to clean up nes2016_raw dataset.
corr
and corr.test
function to estimate and test the partial correlation coefficients;