UCSCXenaShiny 1.1.8
- Fixed issue to set mislabelled color in pcawg pan-cancer analysis
(#247, Thanks to Tangjian Li).
- Fixed issue in querying gene signature in general analysis page
(#244).
- Fixed issue “Radar plot “stemness” does not plot the “ACC” tumor
type” (#242).
UCSCXenaShiny 1.1.7
- Added option
include.Tumor.only to control if include
type
- Set default theme if
flatly not available.
- Added example to generate radar plot, close #239
UCSCXenaShiny 1.1.6
- Added description of extra datasets.
UCSCXenaShiny 1.1.5
- Fixed survival KM plot output issue due to
ggsave()
failure in General Analysis page. (#230)
UCSCXenaShiny 1.1.4
- Fixed the colnames being changed by
as.data.frame()
when querying a symbol with unvalid R name. (Related to #234)
- Added more informative error for scatter plot in General Analysis
tab. (#233)
- Reversed default color setting for groups in survival analysis to
fit conventional color grouping (in Xena). (#232, thanks to feedback
from Enrique)
- Supported known science palette and custom colors for survival
analysis in Quick PanCan Analysis tab.
UCSCXenaShiny 1.1.3
- Data check. (#225)
- Fixed survival KM plot output issue due to
ggsave()
failure. (#230)
UCSCXenaShiny 1.1.2
- Fixed value query for gene signature with
purrr lambda
function.
- Updated dataset doc.
- Uploaded zenodo link.
- Uploaded this tool to conda forge, the user can install it from
conda now. For more details, please read the README file.
UCSCXenaShiny 1.1.1
- Updated citation.
- Fixed the data loading bug due to function scope problem
(#222).
UCSCXenaShiny 1.1.0
- Supported uploading data files for analysis.
- Improved user experience.
- Added more contents in README.
- Corrected LICENSE (this package is built on the top of code with
GPLv3 LICENCE).
- Added docker image for UCSCXenaShiny https://hub.docker.com/r/shixiangwang/ucscxenashiny.
UCSCXenaShiny 1.0.1
- Added a package doc site link in usage navbar list.
- Fixed bug of PCAWG survival analysis (#209).
UCSCXenaShiny 1.0.0
This the first stable and formal version of
UCSCXenaShiny. We have refactored the whole R package and
corresponding Shiny for service.
Enjoy yourself.