VertexSort: Network Hierarchical Structure and Randomization
Permits to apply the 'Vertex Sort' algorithm (Jothi et al. (2009) <10.1038/msb.2009.52>) to a graph in order to elucidate its hierarchical structure. It also allows graphic visualization of the sorted graph by exporting the results to a cytoscape friendly format. Moreover, it offers five different algorithms of graph randomization: 1) Randomize a graph with preserving node degrees, 2) with preserving similar node degrees, 3) without preserving node degrees, 4) with preserving node in-degrees and 5) with preserving node out-degrees.
| Version: |
0.1-1 |
| Depends: |
R (≥ 3.3.2), igraph, snowfall |
| Published: |
2017-03-09 |
| Author: |
Diala Abd-Rabbo |
| Maintainer: |
Diala Abd-Rabbo <diala.abd.rabbo at gmail.com> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: |
no |
| CRAN checks: |
VertexSort results |
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