MCR_table. The coordinates were converted to hg19 (from hg18)caret::predict.train explicitcreate_SCNA_score_df() where the SCNA score was not calculated because the column name for “MCR_overlap_percent” was incorrectly assigned as “transcript_overlap_percent”TCGA_MTL_fit and specific_thresholds after fixing the issue abovena.string argument to create_noncoding_impact_score_df(), predict_coding_impact() and create_features_df() as the string that was used to indicate when a score is not available during annotation with ANNOVAR (default = “.”)determine_hotspot_genes() to able to use occurrence annotations from different versions of COSMICInitial release