Getting Started with Modeltime


Forecasting with tidymodels made easy! This short tutorial shows how you can use:

…to perform classical time series analysis and machine learning in one framework! See “Model List” for the full list of modeltime models.

Quickstart Video

For those that prefer video tutorials, we have an 11-minute YouTube Video that walks you through the Modeltime Workflow.

Introduction to Modeltime

(Click to Watch on YouTube)

The Modeltime Workflow

Here’s the general process and where the functions fit.

The Modeltime Workflow

The Modeltime Workflow

Just follow the modeltime workflow, which is detailed in 6 convenient steps:

  1. Collect data and split into training and test sets
  2. Create & Fit Multiple Models
  3. Add fitted models to a Model Table
  4. Calibrate the models to a testing set.
  5. Perform Testing Set Forecast & Accuracy Evaluation
  6. Refit the models to Full Dataset & Forecast Forward

Let’s go through a guided tour to kick the tires on modeltime.

Time Series Forecasting Example

Load libraries to complete this short tutorial.

library(xgboost)
library(tidymodels)
library(modeltime)
library(tidyverse)
library(lubridate)
library(timetk)

# This toggles plots from plotly (interactive) to ggplot (static)
interactive <- FALSE

Step 1 - Collect data and split into training and test sets.

# Data
m750 <- m4_monthly %>% filter(id == "M750")

We can visualize the dataset.

m750 %>%
  plot_time_series(date, value, .interactive = interactive)

Let’s split the data into training and test sets using initial_time_split()

# Split Data 80/20
splits <- initial_time_split(m750, prop = 0.9)

Step 2 - Create & Fit Multiple Models

We can easily create dozens of forecasting models by combining modeltime and parsnip. We can also use the workflows interface for adding preprocessing! Your forecasting possibilities are endless. Let’s get a few basic models developed:

Important note: Handling Date Features

Modeltime models (e.g. arima_reg()) are created with a date or date time feature in the model. You will see that most models include a formula like fit(value ~ date, data).

Parsnip models (e.g. linear_reg()) typically should not have date features, but may contain derivatives of dates (e.g. month, year, etc). You will often see formulas like fit(value ~ as.numeric(date) + month(date), data).

Model 1: Auto ARIMA (Modeltime)

First, we create a basic univariate ARIMA model using “Auto Arima” using arima_reg()

# Model 1: auto_arima ----
model_fit_arima_no_boost <- arima_reg() %>%
    set_engine(engine = "auto_arima") %>%
    fit(value ~ date, data = training(splits))
#> frequency = 12 observations per 1 year

Model 2: Boosted Auto ARIMA (Modeltime)

Next, we create a boosted ARIMA using arima_boost(). Boosting uses XGBoost to model the ARIMA errors. Note that model formula contains both a date feature and derivatives of date - ARIMA uses the date - XGBoost uses the derivatives of date as regressors

Normally I’d use a preprocessing workflow for the month features using a function like step_timeseries_signature() from timetk to help reduce the complexity of the parsnip formula interface.

# Model 2: arima_boost ----
model_fit_arima_boosted <- arima_boost(
    min_n = 2,
    learn_rate = 0.015
) %>%
    set_engine(engine = "auto_arima_xgboost") %>%
    fit(value ~ date + as.numeric(date) + factor(month(date, label = TRUE), ordered = F),
        data = training(splits))
#> frequency = 12 observations per 1 year

Model 3: Exponential Smoothing (Modeltime)

Next, create an Error-Trend-Season (ETS) model using an Exponential Smoothing State Space model. This is accomplished with exp_smoothing().

# Model 3: ets ----
model_fit_ets <- exp_smoothing() %>%
    set_engine(engine = "ets") %>%
    fit(value ~ date, data = training(splits))
#> frequency = 12 observations per 1 year

Model 4: Prophet (Modeltime)

We’ll create a prophet model using prophet_reg().

# Model 4: prophet ----
model_fit_prophet <- prophet_reg() %>%
    set_engine(engine = "prophet") %>%
    fit(value ~ date, data = training(splits))
#> Disabling weekly seasonality. Run prophet with weekly.seasonality=TRUE to override this.
#> Disabling daily seasonality. Run prophet with daily.seasonality=TRUE to override this.

Model 5: Linear Regression (Parsnip)

We can model time series linear regression (TSLM) using the linear_reg() algorithm from parsnip. The following derivatives of date are used:

  • Trend: Modeled using as.numeric(date)
  • Seasonal: Modeled using month(date)
# Model 5: lm ----
model_fit_lm <- linear_reg() %>%
    set_engine("lm") %>%
    fit(value ~ as.numeric(date) + factor(month(date, label = TRUE), ordered = FALSE),
        data = training(splits))

Model 6: MARS (Workflow)

We can model a Multivariate Adaptive Regression Spline model using mars(). I’ve modified the process to use a workflow to standardize the preprocessing of the features that are provided to the machine learning model (mars).

# Model 6: earth ----
model_spec_mars <- mars(mode = "regression") %>%
    set_engine("earth") 

recipe_spec <- recipe(value ~ date, data = training(splits)) %>%
    step_date(date, features = "month", ordinal = FALSE) %>%
    step_mutate(date_num = as.numeric(date)) %>%
    step_normalize(date_num) %>%
    step_rm(date)
  
wflw_fit_mars <- workflow() %>%
    add_recipe(recipe_spec) %>%
    add_model(model_spec_mars) %>%
    fit(training(splits))

OK, with these 6 models, we’ll show how easy it is to forecast.

Step 3 - Add fitted models to a Model Table.

The next step is to add each of the models to a Modeltime Table using modeltime_table(). This step does some basic checking to make sure each of the models are fitted and that organizes into a scalable structure called a “Modeltime Table” that is used as part of our forecasting workflow.

We have 6 models to add. A couple of notes before moving on:

models_tbl <- modeltime_table(
    model_fit_arima_no_boost,
    model_fit_arima_boosted,
    model_fit_ets,
    model_fit_prophet,
    model_fit_lm,
    wflw_fit_mars
)

models_tbl
#> # Modeltime Table
#> # A tibble: 6 × 3
#>   .model_id .model     .model_desc                              
#>       <int> <list>     <chr>                                    
#> 1         1 <fit[+]>   ARIMA(0,1,1)(0,1,1)[12]                  
#> 2         2 <fit[+]>   ARIMA(0,1,1)(0,1,1)[12] W/ XGBOOST ERRORS
#> 3         3 <fit[+]>   ETS(M,A,A)                               
#> 4         4 <fit[+]>   PROPHET                                  
#> 5         5 <fit[+]>   LM                                       
#> 6         6 <workflow> EARTH

Step 4 - Calibrate the model to a testing set.

Calibrating adds a new column, .calibration_data, with the test predictions and residuals inside. A few notes on Calibration:

calibration_tbl <- models_tbl %>%
    modeltime_calibrate(new_data = testing(splits))

calibration_tbl
#> # Modeltime Table
#> # A tibble: 6 × 5
#>   .model_id .model     .model_desc                        .type .calibration_da…
#>       <int> <list>     <chr>                              <chr> <list>          
#> 1         1 <fit[+]>   ARIMA(0,1,1)(0,1,1)[12]            Test  <tibble>        
#> 2         2 <fit[+]>   ARIMA(0,1,1)(0,1,1)[12] W/ XGBOOS… Test  <tibble>        
#> 3         3 <fit[+]>   ETS(M,A,A)                         Test  <tibble>        
#> 4         4 <fit[+]>   PROPHET                            Test  <tibble>        
#> 5         5 <fit[+]>   LM                                 Test  <tibble>        
#> 6         6 <workflow> EARTH                              Test  <tibble>

Step 5 - Testing Set Forecast & Accuracy Evaluation

There are 2 critical parts to an evaluation.

5A - Visualizing the Forecast Test

Visualizing the Test Error is easy to do using the interactive plotly visualization (just toggle the visibility of the models using the Legend).

calibration_tbl %>%
    modeltime_forecast(
        new_data    = testing(splits),
        actual_data = m750
    ) %>%
    plot_modeltime_forecast(
      .legend_max_width = 25, # For mobile screens
      .interactive      = interactive
    )

From visualizing the test set forecast:

  • Models 1&2: ARIMA & ARIMA Boost are performing well. Both models have “auto” components because we used Auto ARIMA. The XGBoost component has parameters that were specified. We can possibly get better accuracy by tuning, but because the ARIMA component is working well on this data, additional improvement may be low.
  • Model 3: ETS(M,A,A) is performing the best. The 80% confidence interval is the most narrow of the bunch, indicating the hold out set is modeled well.
  • Model 4: PROPHET is comparable to the ARIMA models, but has a slightly wider test error confidence interval.
  • Model 5: LM is over-shooting the local trend. This is because the trend component is a simple linear line, which doesn’t account for the change points.
  • Model 6: EARTH is overfitting the local trend. This is because we did not tune the number of change points, so the algorithm is auto-calculating the change points.

5B - Accuracy Metrics

We can use modeltime_accuracy() to collect common accuracy metrics. The default reports the following metrics using yardstick functions:

  • MAE - Mean absolute error, mae()
  • MAPE - Mean absolute percentage error, mape()
  • MASE - Mean absolute scaled error, mase()
  • SMAPE - Symmetric mean absolute percentage error, smape()
  • RMSE - Root mean squared error, rmse()
  • RSQ - R-squared, rsq()

These of course can be customized following the rules for creating new yardstick metrics, but the defaults are very useful. Refer to default_forecast_accuracy_metrics() to learn more.

To make table-creation a bit easier, I’ve included table_modeltime_accuracy() for outputing results in either interactive (reactable) or static (gt) tables.

calibration_tbl %>%
    modeltime_accuracy() %>%
    table_modeltime_accuracy(
        .interactive = interactive
    )
Accuracy Table
.model_id .model_desc .type mae mape mase smape rmse rsq
1 ARIMA(0,1,1)(0,1,1)[12] Test 151.33 1.41 0.52 1.43 197.71 0.93
2 ARIMA(0,1,1)(0,1,1)[12] W/ XGBOOST ERRORS Test 147.04 1.37 0.50 1.39 191.84 0.93
3 ETS(M,A,A) Test 77.00 0.73 0.26 0.73 90.27 0.98
4 PROPHET Test 172.05 1.65 0.59 1.65 230.06 0.88
5 LM Test 629.12 6.01 2.15 5.81 657.19 0.91
6 EARTH Test 709.83 6.59 2.42 6.86 782.82 0.55

From the accuracy metrics:

  • Model 3: ETS is clearly the winner here with MAE of 77
  • Model 6: MARS is over-fitting the local trend. This comes out in the R-Squared of 0.55.

Step 6 - Refit to Full Dataset & Forecast Forward

The final step is to refit the models to the full dataset using modeltime_refit() and forecast them forward.

refit_tbl <- calibration_tbl %>%
    modeltime_refit(data = m750)

refit_tbl %>%
    modeltime_forecast(h = "3 years", actual_data = m750) %>%
    plot_modeltime_forecast(
      .legend_max_width = 25, # For mobile screens
      .interactive      = interactive
    )

Refitting - What happened?

The models have all changed! (Yes - this is the point of refitting)

This is the (potential) benefit of refitting.

More often than not refitting is a good idea. Refitting:

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