nandb 2.1.0
MINOR IMPROVEMENTS
- No more messages from
ijtiff I/O.
BUG FIXES
- Insist on bug-fixed
autothresholdr.
nandb 2.0.8
BUG FIXES
- Insist on bug-fixed
filesstrings >= 3.2.
- Remove
LazyData from DESCRIPTION (was causing CRAN note).
nandb 2.0.7
BUG FIXES
- Cope with
ijtiff not working on 32-bit Windows.
nandb 2.0.6
BUG FIXES
nandb 2.0.5
BUG FIXES
skip_on_cran() tests that allow for different C++ <random> implementations (doing these on Travis, AppVeyor and R-hub is enough).
nandb 2.0.4
BUG FIXES
- Exclude a test on CRAN oldrel.
- Insist on latest, bug-fixed
ijtiff v2.0.2.
nandb 2.0.3
BUG FIXES
- Fix tests on CRAN Solaris and Windows oldrel.
- Insist on latest, bug-fixed
filesstrings v3.1.5.
nandb 2.0.2
BUG FIXES
- Insist on new
filesstrings. Old filesstrings was wreaking havoc on nandb due to its incompatibility with older versions of strex. See https://github.com/rorynolan/strex/issues/2.
nandb 2.0.1
BUG FIXES
- Require necessary versions of
glue and filesstrings and newest, least buggy ijtiff, autothresholdr and detrendr.
nandb 2.0.0
MAJOR CHANGES
- Robin Hood detrending is now used instead of exponential smoothing detrending. This is a breaking change.
NEW FEATURES
- The
timeseries functions now have the option to overlap for better time resolution.
- A
pkgdown website!
nandb 1.1.0
NEW FEATURES
matrix_raster_plot() is back. I thought it didn’t really fit but a user said they missed when it was gone so it’s back now.
nandb 1.0.1
BUG FIXES
- Fix issues on CRAN linux devel clang.
nandb 1.0.0
NEW FEATURES
- The package is now peer-reviewed and published in the journal Bioinformatics. See
citation("nandb").
- The package style is now in accordance with the tidyverse style guide.
brightness() and number() now include options to set offset, S-factor, readout_noise and gamma correction terms.brightness() and number() now enable calculation of both definitions (“B” and “epsilon”; “N” and “n”) of brightness and number.- Detrending is outsourced to the
detrendr package. This new package makes detrending more accurate and much faster.
- TIFF I/O and graphics
display() are now outsourced to the ijtiff package. This means R users no longer have to tell nandb how many channels are in the images.
- The package now has its own S3 class system.
BUG FIXES
- Kmer calculations are no longer possible. The way in which they were done was over-simple.
nandb 0.2.1
BUG FIXES
- Compatible with
filesstrings 1.1.0.
nandb 0.2.0
- The first version that I consider CRAN-worthy.