The field of immunology benefits from software that can
predict which peptide sequences trigger an immune response.
'NetMHCIIpan' is a such a tool: it predicts the
binding strength of a short peptide to a Major Histocompatibility
Complex class II (MHC-II) molecule.
'NetMHCIIpan' can be used from a web server at
<https://services.healthtech.dtu.dk/service.php?NetMHCIIpan-3.2/>
or from the command-line, using a local installation. This package
allows to call 'NetMHCIIpan' from R.
| Version: |
1.3.1 |
| Imports: |
assertive, devtools, dplyr, rappdirs, readr, seqinr, stringr, testit, tibble |
| Suggests: |
knitr, rmarkdown, testthat, spelling |
| Published: |
2020-11-18 |
| Author: |
Richèl J.C. Bilderbeek
 [aut, cre],
Byungkuk Min [ctb] |
| Maintainer: |
Richèl J.C. Bilderbeek <richel at richelbilderbeek.nl> |
| BugReports: |
https://github.com/richelbilderbeek/netmhc2pan/issues |
| License: |
GPL-3 |
| URL: |
https://github.com/richelbilderbeek/netmhc2pan/ |
| NeedsCompilation: |
no |
| SystemRequirements: |
NetMHC2pan
(https://services.healthtech.dtu.dk/service.php?NetMHCIIpan-3.2) |
| Language: |
en-US |
| CRAN checks: |
netmhc2pan results |