blocks to guide reading raster data in chunks.
#748 by John
Baumsextract were simplified. #736 by François
Rousseufocal where not correct if the input
SpatRaster had multiple layers and a “custom” function. #727 by Jean-Luc
Dupouey.plot<SpatRaster> did not honor argument
legend=FALSE. #738 by Grzegorz
Sapijaszkoexpanse failed when processing in chunks #741 by Gareth
Daviescrop<SpatRaster,SpatExtent> with snap=“out” could
lead to a crash if the extent was beyond the SpatRaster. #740 by Mauricio
Zambrano-Bigiarinisubst no longer uses values that it changed earlier on.
#639 by Paul
Smithas.points<SpatRaster> could return wrong factor
labels. #640
by Attilio Beninimask<SpatRaster,SpatVector> crashed when the
results were written to disk. #646 by Monika
Anna Tomaszewskaextract<SpatRaster,SpatVector(points)>(xy=TRUE)
returned the locations of the points, not the xy-coordinates of the
cells. #650
by Ward Fonteynwrap<SpatRaster> did not return the correct
labels for some categorical rasters. #652 by Jakub
Nowosadsubst can now substitute the values from multiple input
layers with a single output value (layer)subset<SpatVector> now behaves like
subset<data.frame> #648 by Andrew
Gene Brownfreq now provides the labels of factors, even if
bylayer=FALSE. It now always returns a
data.frame (it used to return a matrix in some
cases. #687
by Rodolfo Jaffédisagg and aggregate now return a warning
instead of an error when using a (dis)aggregation factor of 1.#684 by Justin
Fain.project crashed when erroneously projecting raster data
from one celestial body to another #688 by Mike
Sumnerplot. 673 by Jakub
Nowosad.extract(method="bilinear"). 693 by
swooping-magpieas.raster to
unique<SpatRaster> to create a categorical raster
with the unique combinations in the layers of the input raster. The
default for argument na.rm was changed to
FALSEsort<SpatRaster> to sort cell values across
layers.has.colors and has.RGB for SpatRastercover can now combine categorical rastersconcats to combine the levels of two SpatRaster into
new categories 663 by Alex
Ilichzonal<SpatVector,SpatVector> method to aggregate
SpatVector attributes by polygonsReleased on 2022-06-09
extract. #580 by André M.
Bellvéweighted.mean did not adjust the weights if there were
NAs in the values. #574 by Lars
Dalbystretch option in plotRGB #550 by Agustin
LobospatSample with cells=TRUE failed for
planar data #544 by Benjamin
MisiukcompareGeom(x, y, stopOnError=FALSE) did not remove the
error messages stored in x leading to unexpected warnings
later on. #568 by David
Hofmann.layerCor does not create temp files anymore. #551 by
Christine Andersonres and origin to
project<SpatRaster> method. #596 by Alex
Ilichinside=TRUE to centroids to
get a centroid-like point that is guaranteed to be on the geometry
(“point on surface”). #588 by Márcia
Barbosakeepgeom=FALSE to
vect<data.frame> that allows setting (keeping) the
geometry as an attribute. #586 by Márcia
BarbosasaveRDS and serialize methods for
SpatRaster and SpatVector. #549 by Andrei
MîrțxFromCol and yFromCol now have a
<SpatRaster,missing> method. #583 by Michael
Sumner.svc<sf> method to deal with GeometryCollection
types. #585
by Sarah Endicottas.points<SpatRaster> and
as.polygons<SpatRaster> have a new argument
na.all=FALSE that affects the interpretation of
na.rm. #548 by Jean-Luc
Dupouey.setGDALconfig and getGDALconfig to set
GDAL configuration options. #608 by Erik
Bolch.circular to rapp to allow the
start to be after the end (for if layers represent days of the
year)costDistance<SpatRaster>where.min and where.max for
SpatRaster to get the cell numbers for the extreme values
in a SpatRaster.emptyGeoms<SpatVector> to get the
indices of empty (null) geometriesrasterizeGeom to rasterize the geometry
count or the area of (small) polygons or the length of lines.not.na for SpatRaster which is
a shortcut for !is.na(x).as.list implemented for
<SpatRasterDataset>.sources implemented for
<SpatRasterDataset>, <SpatVector>
and <SpatVectorProxy> #638 by Andrew
Gene BrownReleased on 2022-02-17
writeVector and vect now work with GPGK if
the path has non-ascii characters #518predict with cores > 1
and more than one output variable were garbledzonal dropped category names when using an external (R)
function #527
by Jakub Nowosadxy=TRUE in as.data.frame normalized
the names #538 by Kodi
Arferoptions to vrt #629 by Monika
Tomaszewska.makeTiles has new arguments extend and
na.rm #520 by by L.
Dalbyproject<SpatRaster> now uses nearest neighbor as
default method for RGB rastersna.rm=TRUE to unique. #561 by Matthieu
StiglerReleased on 2022-01-30
app<SpatRasterDataset> ignored the filename. #498 by
jszhaovect<data.frame> failed silently if xy
coordinates were integers #496 by Márcia
Barbosaaggregate<SpatRaster> was malformed
when nrow(x) %% fact != 0. #492 by
Jean-François BourdonNAs in SpatVector attributes where only
recognized on Windows #491 by Márcia
Barbosaplot<SpatVector> failed when using a character
variable with many unique values. #489 by Márcia
Barbosarotate failed on large files. Reported by Ujjawal
Singhcrds replicated the coordinates #504 by Murray
Effordas.data.frame<SpatRaster> returned integers if
the file stored values as integers, even if there was a scale/offset
that creates decimal numbers #509 by Kodi
Arferproject opened the input raster file in read/write mode
intead of read mode. That did not work with files that cannot be
updated.distance, gridDistance,
direction and patches now process all layers
of the input SpatRaster. #503 by Chris
Haak()<- methods.
in-place updating available with set. methods such as
set.names and set.values. #493 by Jean
Romain and 511 by Bryan
Fuentesaggregate<SpatRaster> now accepts functions that
return more than one value per aggregated cellwriteVector has new argument insert to add
a layer to an existing file (e.g. GPKG).method="weights" for
spatSample<SpatRaster>mask<SpatVector,SpatVector> method to select
intersecting geometriesis.relatedvalues<SpatRaster> has new option
na.rm=TRUE. #490 by Henk
HarmsenSpatVectorProxy to provide access to large
vector databases that cannot or should not be read into memory in its
entirety.proxy=FALSE to vect to create
a SpatVectorProxy objectquery<SpatVectorProxy> to extract
parts of a SpatVectorProxyvector_layers that returns, and can delete,
vector format layers from a database/file such as GPKGTo avoid name clashes with tidyverse
For consistency
Released on 2022-01-13
setValues and init failed (or even crashed
R) when using a single value on a largish raster. #414sfc to SpatVector lost the
crs. #415 by
Jean-Luc Dupoueybuffer on a SpatRaster with no values caused a crash #416 by
Sebastian BrinkmannwriteVector now assumes “traditional GIS order”
(long/lat) if the CRS specifies lat/long. #333 by Agustin
Lobomain was ignored in density when
using a single layer SpatRaster #424 by
dvictorimin and
mean, when used with multiple SpatRasters and numbers,
ignored additional SpatRasters #426 by Zhuonan
Wangclassify with right=FALSE ignored
include.lowest=TRUE #442 by Alex
Ilichpatches now combines patches that connect across the
data line #366 by
Hirschtpatches(directions=8) now connects in NE/SW direction
#451 by
Jean-François Bourdon.centroids now considers cases where SpatVector parts
are nearest to each other when crossing the date line in stead of the
zero-meridian #366 by
Hirschtterrain created empty (NA) rows between
chunks used for processing large rasters. #453 by Robert
Ritson.inset did not draw the “box” correctly. #457 by Márcia
Barbosaas.lines now works with a points SpatVector #464 by Márcia
Barbosavalues(x)<- now accepts (hex coded) colors as
valuesfocal now wraps around the dateline like raster::focal
#242 by
Alexander Marbleraggregate now does not show a progress bar in all cases
#249 by
Lachlanas.data.frame<SpatRaster> or <SpatVector>
are now also implemented as S3 methods to assure correct dispatch by
other S3 methods such as data.table::as.data.table. See #284 by Patrick
Schratzcrs now shows the correct authority if it is not EPSG.
#419 by
Matthew Williamsonrast<filename> has a new argument
lyrs to subset the layers and open the file in one
step.rast<array> now has a crs and extent argument. #439 by
RS-ecotype="xyz" is now default in
rast<data.frame>. #438 by
RS-ecoclassify has a new argument brackets to
show if a side of an interval is open or closed.freq and
as.data.frame. #441
ngould7vect<matrix> and
vect<data.frame> are now much faster. #413 by
BastienFRextract with points provided as a matrix or cell
numbers is not much faster. #341focal has a new argument na.policy that
can be set to one of “all” (default), “only” or “omit”. argument
na.only has been removed, as you can now use
na.policy="only"inset argument border changed to
perimeter to allow passing border on to
plot<Spat*>. #456 by Márcia
Barbosamemfrac can now be set to zero (in stead
of not lower than 0.1). #476 by Matt
Strimas-MackeyallowGaps in patches to
disallow gaps between patch IDs. See #478 by Dunbar
Carpenter.mergeTime to combine multiple rasters,
perhaps partly overlapping in time, into a single time seriesfillTime that can add empty layers in
between existing layers to assure that the time step between layers is
constantapproximate to fill in missing values by
cell across layersis.bool and as.bool for
SpatRaster and explicit recognition of Boolean raster data in various
places (e.g., extract, plot)is.int and as.int for
SpatRaster.layerCor (like
raster::layerStats). #420 by Alex
IlichfocalCor (like
raster::corLocal). #427 by Zhuonan
Wangall.equal for SpatRaster. See
#428 by
Dongdong Kongmath for SpatRaster that
implements the Math-generic methods and accepts a filenamesds<array>rasterize<matrix>, see #413 by
BastienFRcolorize to transform color
representationsarrow to draw a (North) arrow on a map. #461 by Márcia
Barbosadensify to insert nodes between existing
nodes of a line or polygon SpatVectordirection for SpatRaster. #462 by Márcia
Barbosafocal3D to compute focal values for a
three-dimensional (row, column, layer) windowmakeVRT to create a vrt file for a file
that needs a header to be read.method="stratified" for
spatSample<SpatRaster>. #470 by Michael
Mahoneymemmax to cap the amount of RAM that
terra can be used in raster processing #476 by Matt
Strimas-MackeygridDistance to compute distances traversing
a raster, perhaps with obstacles. #477 by Márcia
BarbosaReleased on 2021-11-24
focal now has ellipses (...) to allow for
providing additional arguments to fun. For this reason it
does not have a na.rm argument anymore as that can be
supplied via the ellipses. In practice this means that the default will
be na.rm=FALSE for the standard functions such as
mean and sum.app grossly overestimated RAM needed, slowing it down.
Reported by Jerry Nelsonterra now installs, again, with older versions of GEOS
#406 by
fparyaniterra did not install with Clang on CRAN/OSX due to
using C++13 idiom.lapp and tapp now have a
cores argument (as do app and
predict). Suggested by Dongdong Kong #365focal now also works with a function that returns
multiple values (see #318 by Alex
Ilich).focal can now process multiple layers in one step.stars objects #220 by Jakub
NowosadfocalCpp takes a C++ function that iterates over cells
to speed up computation by avoiding apply (see #318 by Alex
Ilich).focalReg for focal OLS regression models between
layersReleased on 2021-11-16
terra did not install with versions of GDAL below 3 #402 by Alex
Ilich.distance between two SpatVectors or matrices with
pairwise=FALSE returned a matrix that was filled by column
instead of by row #403 by Paul
SmithReleased on 2021-11-15
rast with some NetCDF files failed because of bad
parsing of dates. #361 by Juan
Carlos Zamora-Pereiradistance<SpatRaster> with lon/lat data was not
correct. #368
by Greg Schmidtas.polygons<SpatRaster> failed with a SpatRaster
and a categorical layer that is not the first layer. #370 by Patrick
Schratzrasterize was not ignored,
also causing errors when writing to temporary files. #377 by Robbie
Pricerast<character> crashed if the sds was an empty
character string. #381 by Dan
Bastonplot<SpatVector> now responds to the
range argument #385 by Márcia
Barbosazonal failed for user-defined functions. #393 by
mqueinnecselectHighest to select n cell values with
the highest or lowest values.vect<list> to append SpatVectors
(faster than do.call(rbind, x))align=FALSE to project to
align to the template SpatRaster but ignore the resolutiongdalCache to set the GDAL cache size,
contributed by Dan Baston #387fileBlocksizeoptions to writeVector to
pass layer creation options to GDALmergeLines,
snap, makeNodes, removeDupNodes,
gaps, simplifywidth and
clearanceterra now installs with older versions of GEOS #363terra now installs on CentOS 7 with GDAL 2.1.4 and a
C++ compiler that does not support std::regexp. #384 by Ariel
PaulsonReleased on 2021-10-11
setValues now has two arguments
(x and values), just like raster
had; to avoid reverse dependency problems with rasterReleased on 2021-10-07
To avoid name conflicts with sp (via
raster) disaggregate is now called
disagg and bbox,SpatRaster and
bbox<SpatVector> have been removed (but could be
resurrected in raster or under another name).
project and resample now choose the
resampling method based on the first layer, using “near” for categorical
data. Thanks to Matthew Lewis #355hist failed with small samples. Issue #356 by Martin
QueinnecReleased on 2021-10-05
terra no longer depends on raster. To avoid
name clashes between these two packages, and to allow replacing methods
from rgeos and rgdal in raster,
raster now depends on terra instead.
freq has a new argument usenames. See
issue #309 by
Bappa Dasrast<character> has a new argument
opts that can be used to pass GDAL open options. See issue
#314rast<SpatRaster> now takes arguments
names and vals. See issue #323 by Dongdong
Kongcrs<- now warns if an unsupported datum is used. See
issue #317spatSample now returns factor values if a SpatRaster
layer is.factor except when using as.df=FALSEorigin<- to set the origin of a
SpatRaster. See issue #326 by Jakub
Nowosadcrs has a new argument parse. See #344plot<SpatRaster,missing> has a new argument
reset=FALSE that allows resetting the par()$mar parameters
after plotting. See issue #340 by Derek
Friendcrds has a new argument na.rm. See #338 by Kodi
Arfershow(Spat*) now prints the name and EPSG code of a crs
if available. See #317 by Jakub
NowosadplotRGB failed if there were NAs. Issue #308 by Jakub
NowosadwriteVector crashed R when used with a SpatVector with
no geometries. Reported by Timothy White in issue #319summary<SpatRaster> now returns counts for the
classes (instead of a numerical summary of the indices) #324 by Jakub
Nowosadtapp with a character index now returns a SpatRaster
with the correct names #345 by Stuart
Brownrasterize with a character variable now adds the ID
column to the categories #337 by Tate
BraselcellSize now masks values in all cases (when requested
with mask=TRUE). Issue #339 by Jean-Luc
Dupoueybuffer<SpatVector> no longer treats lines like
polygons #332
by Márcia Barbosaplot now passes the layer index to fun #310 by Ben
Tupperto_id in nearest was sometimes wrong.
See #328 by
Shawn Ligockifocal did not reset initial values for NA cells when
processing chunks. #312 by Jeffrey
Evansfocal could run out of memory when using a large window
and user-defined function, and was inexact at the chunk boundary #347zonal with as.raster=TRUE failed for
categorical SpatRasters #348 by Jakub
NowosadReleased on 2021-08-20
time(x) <- d is set with a Date
class object, time(x) now returns a Date
object instead of a POSIXct object. Issue #256 raised by
Mauricio Zambrano-Bigiarinirast<data.frame> method to avoid confusion with
the matrix and list methods in response to a
SO question by
StackbeanswriteCDF now also writes the time dimensions if there
is only one time-step. See this SO questionvect<character> (filename) now has argument
layer to select a layer from a multi-layer file / database,
and arguments query, extent and
filter for reading a subsetsubst can now create multiple output layers See issue 276 by
Agustin Loboclassify can now create different multiple output
layers See issue
276 by Agustin Loboalpha of plot<SpatRaster>
can now be a SpatRaster. See this SO question by
James McCarthyfilename and overwrite arguments were
ignored in rasterizeproject. Reported by
Fabian Fischerrasterize<SpatRaster,SpatVector> with
inverse=TRUE crashed the R session. Issue #264 by Jean-Luc
Dupoueymerge and mosaic was not
correct for large rasters (only the first rows were used). Reported by
Zavud Baghirov in #271as.points,SpatRaster did not remove NA’s
correctly and shifted values. Issues #269 and #273 by Julian
Hagenauerrast<matrix> rotated values when using an
equal-sided matrix #274 by Jakub
Nowosadproject with a crs argument. #283 by Timothée
Giraudclassify, argument right had TRUE and
FALSE reversed.terrain had edge effects #303 by Andrew
Gene Brown.terrain can now compute multiple variables at once #286 by Žan
Kuraltwrap<SpatRaster> changed factors into numeric #302 by Patrick
SchratzwriteVector failed with “FlatGeobuf” (and probably
other formats as well) for not using a proper MultiPolygon #299 by L
DalbyspatSample is now
much more regular #289 by Jakub
NowosadReleased on 2021-06-20
na.omit<SpatVector> to remove empty geometries
and/or attribute records that have an NAsrc to create a
SpatRasterCollection (a loose collection of tiles).merge and mosaic now have methods for a
SpatRasterCollection. To avoid the (inefficient) use of
do.call. See issue #210 by Matthew
Talluto.activeCat and activeCat<- to get or set
the “active” category if there are multiple categories (raster
attributes)as.numeric and catalyze to transfer
categories to numeric cell valuesrange and mean
for (the attributes of) a SpatVectorshade, to compute hill shadingna.rm) are now used by
rasterize with point geometries. Suggested by Jakub Nowosad
#209gstat models
by interpolate. See issue #208 by Jakub
Nowosad.cpkgs to predict to list the
packages that need to be exported to the cores if argument
cores is larger than one. ?predict now shows
different approaches to parallelize predict (based on
examples in issue #178 raised by
by Matthew Coghill).freq now returns labels for categorical layersadjacent now has a pairs argument.
Requested by Kenneth Blake Vernon in issue #239adjacent now also takes a matrix to specify adjacent
cellsmean and other summarize methods now take a
filename argument and disallow non-recognized named
arguments. See issue #238 by Jessica
Nephinvat.dbf file is now ignored if it only has the counts
of the values. See issue #234 by
Julleegdal="" write
options and use BIGTIFF if necessary (suggested by Ani Ghosh)layer in the
extract-SpatRaster,SpatVector method to extract values for
a single layers specified for each geometry (see this question).extract with points and cells=TRUE or
xy=TRUE gave garbled outputas.character<SpatRaster> (called by
wrap) did not capture the layer names. Reported by Pascal
Title #213focal mirrored the weight matrix, thus affecting the
results when using an asymmetrical weight matrix. Reported by Sebastiano
Trevisaniterra::terraOptions now works without attaching the
package (issue #229 reported by
Karl Dunkle Werner)app with ncores > 0 and a function that
returns multiple layers now works (issue #240 reported by
BastienFR.autocor (local) can now handle NA values.
Reported by Jakub Nowosad #245.mask with a SpatVector and a large (out of memory)
multi-layer SpatRaster only worked for the first layer. Reported by
Monika Tomaszewska.Released on 2021-05-13
as.lines method for SpatRasteras.polygons method for SpatVector linesautocor<numeric> has new methods
mean, to compute the local mean, and locmor,
for the local Moran’s IsharedPaths method for SpatVector (lines and
polygons)RGB2col method to reduce a three-layer RGB SpatRaster
to a single layer SpatRaster with a color-table (with <= 256
colors)split methods for SpatVector and SpatRasterrast<Raster*> now takes the crs from the Raster
object, not from the file it may point to. [#200] by Floris
Vanderhaegheconvhull has a new argument by="" to make
convex hulls for sub-sets of a SpatVector.extract with multiple layers could return a data.frame
where the values were not in the correct order (by row instead of by
column)crop works again with sf objects. [#201]
by Sebastian Brinkmannvect<sf> now also works for lines, and should be
fastervect<character> crashed R if a file had empty
geometries. [#202] by consumereextract(points, bilinear=TRUE, cells=TRUE) now works.
[#203] by fab4appzonal now works for min and
max. [#207] Reported by Jakub NowosadTo avoid name conflicts with the spatstat package
area,SpatRaster-method(x, sum=FALSE) ->
cellSize(x)area,SpatRaster/SpatVector-method(x, sum=TRUE) ->
expanse(x)convexhull -> convHullperimeter -> perimtiles -> makeTilescoords -> crdsReleased on 2021-04-30
trim has a new argument value that allows
trimming rows and columns with other values than the default
NArapp has a new argument clamp that allows
clamping start and end values to 1:nlyr(x), avoiding that
all values are considered NAspatSample<SpatRaster> has new arguments
as.points and values. Getting values, cells
and coordinates is no longer mutually exclusive. In response to [#191]
by Agustin Loboarea<SpatRaster> has a new argument
mask=FALSEclassify can now take a single number to request that
many cutsmosaic and merge now warn and resample if
rasters are not alignedextract has a new argument exact to get
the fraction covered for each cellflip(x, direction="vertical") no longer reverses the
order of the layersextract did not work for horizontal or vertical lines
as their extent was considered invalid. Reported by Monika
Tomaszewskaautocor did not handle NA values [#192] by Laurence
Hawkernearest now works for angular coordinatesslope in terrain was not
correct (the tangent was returned instead of the slope), [#196] by Sven
Alderquantile now works for rasters that have cells that are
all NA. Reported by Jerry NelsonTo avoid name conflicts with tidyverse
with deprecation warning:
without deprecation warning:
Released on 2021-04-14
c<SpatVector> now returns a list.
rbind is used to append SpatVector objectsrats has been removed,
and levels and cats have changed