MOJOV-package | Mojo Variants: Rare Variants analysis tool. |
adjustAuto-method | Class '"MOJOV"' |
adjustData-method | Class '"MOJOV"' |
adjustGender-method | Class '"MOJOV"' |
adjustPower-method | Class '"MOJOV"' |
adjustPowerPvalue-method | Class '"MOJOV"' |
adjustPvalue-method | Class '"MOJOV"' |
adjustTerms-method | Class '"MOJOV"' |
analyCode-method | Class '"MOJOV"' |
analyWeighted-method | Class '"MOJOV"' |
geno | A data file contains genotype. |
genoChr-method | Class '"MOJOV"' |
genoFile-method | Class '"MOJOV"' |
genoGene-method | Class '"MOJOV"' |
genoH-method | Class '"MOJOV"' |
genoIID-method | Class '"MOJOV"' |
genoPosi-method | Class '"MOJOV"' |
genoVariant-method | Class '"MOJOV"' |
MOJOV | Mojo Variants: Rare Variants analysis tool. |
MOJOV-class | Class '"MOJOV"' |
MOJOV.analysis | Analysis between rare variants and quantatitive traits using CMC. |
MOJOV.export | Export test result from a MOJOV class to file. |
MOJOV.genoMatrix | A internal function. It generates a genotype matrix. |
MOJOV.genoVector | A internal function. It makes genotype matrix become a genotype vector. |
MOJOV.linearRegAnalysis | A internal function. Linear regression analysis between rare variants and phenotype. |
MOJOV.phenotype | Ajusting phenotype data for covariates. |
MOJOV.read | Reading genotype and phenotype and generating a "MOJOV" class. |
MOJOV.regTermTest | A internal function. A test from survey package. |
MOJOV.saws | A test from saws package. |
MOJOV.simulation | Simulation for CMC. |
MOJOV.summary | Exporting summary information for genotype. |
MOJOV.Summary-class | Class '"MOJOV.Summary"' |
MOJOV.wald.test | A test from aod package. |
MOJOV.weight | Providing a weight vector. |
phen | A data file contains phenotype. |
phenoAge-method | Class '"MOJOV"' |
phenoColumn-method | Class '"MOJOV"' |
phenoData-method | Class '"MOJOV"' |
phenoFile-method | Class '"MOJOV"' |
phenoGender-method | Class '"MOJOV"' |
phenoHeight-method | Class '"MOJOV"' |
phenoIID-method | Class '"MOJOV"' |
phenoIndNum-method | Class '"MOJOV"' |
phenoLabel-method | Class '"MOJOV"' |
phenoWeight-method | Class '"MOJOV"' |
regionChr-method | Class '"MOJOV"' |
regionFile-method | Class '"MOJOV"' |
regionGene-method | Class '"MOJOV"' |
regionPStart-method | Class '"MOJOV"' |
regionPStop-method | Class '"MOJOV"' |
regionType-method | Class '"MOJOV"' |
resultMethod-method | Class '"MOJOV"' |
resultPvalue-method | Class '"MOJOV"' |
show-method | Class '"MOJOV"' |
show-method | Class '"MOJOV.Summary"' |
varFreq-method | Class '"MOJOV"' |
varMAF-method | Class '"MOJOV"' |
varRare-method | Class '"MOJOV"' |
varTot-method | Class '"MOJOV"' |