Age-Depth Modelling using Bayesian Statistics


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Documentation for package ‘rbacon’ version 2.3.7

Help Pages

rbacon-package rbacon
accrate.age Obtain estimated accumulation rates for any age of a core.
accrate.age.ghost Plot a core's accumulation rates against calendar time.
accrate.depth Obtain estimated accumulation rates as for any depth of a core.
accrate.depth.ghost Plot modelled accumulation rates against the depths of a core.
add.dates Add dates to age-depth plots
age.pMC Calculate pMC values from C14 ages
agedepth Plot an age-depth model
agemodel.it Extract one age-model iteration
AgesOfEvents Event probabilities against calendar age
Bacon Main age-depth modelling function
Bacon.Age.d Output all ages for a single depth.
Bacon.cleanup Remove files made to produce the current core's age-depth model.
Bacon.hist Calculate age distributions of depths.
bacon2clam Translate Bacon .csv files to clam .csv files.
Baconvergence Test to identify poorly mixed MCMC runs.
Bacon_runs List the folders present in the current core directory.
calib.plot Plot the dates
clam2bacon Translate clam .csv files to Bacon .csv files.
copyCalibrationCurve Copy a calibration curve.
flux.age.ghost Plot flux rates for proxies.
mix.curves Build a custom-made, mixed calibration curve.
pMC.age Calculate C14 ages from pMC values.
proxy.ghost Proxies analysed along the depths of a core can be plotted as 'proxy-ghost' graphs against calendar time while taking into account chronological uncertainties. Here darker grey indicates more likely calendar ages for specific proxy values.
rbacon rbacon
scissors Remove the first n iterations.
thinner Thin iterations.