A C D E F H I M P R S T V misc
strum-package | A Package for STRUctural Modeling of Latent Variables for General Pedigree Data |
allRandomEffects | Class '"strumVirtualModel"' |
allRandomEffects-method | Class '"strumVirtualModel"' |
allRandomEffects<- | Class '"strumVirtualModel"' |
allRandomEffects<--method | Class '"strumVirtualModel"' |
ascertainment | Class '"strumVirtualModel"' |
ascertainment-method | Class '"strumVirtualModel"' |
ascertainment<- | Class '"strumVirtualModel"' |
ascertainment<--method | Class '"strumVirtualModel"' |
coding | Class '"strumMarker"' |
coding-method | Class '"strumMarker"' |
coding<- | Class '"strumMarker"' |
coding<--method | Class '"strumMarker"' |
covariatePhenotypes | Class '"strumVirtualModel"' |
covariatePhenotypes-method | Class '"strumVirtualModel"' |
createSimModel | Create strumSimModel Object |
createStrumData | Create strumData Object |
createStrumMarker | Create strumMarker Object |
createStrumModel | Create strumModel Object |
dataType | Class '"strumData"' |
dataType-method | Class '"strumData"' |
dataType<- | Class '"strumData"' |
dataType<--method | Class '"strumData"' |
dataVals | Class '"strumData"' |
dataVals-method | Class '"strumData"' |
dataVals<- | Class '"strumData"' |
dataVals<--method | Class '"strumData"' |
errorRate | Class '"strumMarker"' |
errorRate-method | Class '"strumMarker"' |
errorRate<- | Class '"strumMarker"' |
errorRate<--method | Class '"strumMarker"' |
fittedParameters | Class '"strumFittedModel"' |
fittedParameters-method | Class '"strumFittedModel"' |
fittedParameters<- | Class '"strumFittedModel"' |
fittedParameters<--method | Class '"strumFittedModel"' |
fittedParametersCovMatrix | Class '"strumFittedModel"' |
fittedParametersCovMatrix-method | Class '"strumFittedModel"' |
fittedParametersCovMatrix<- | Class '"strumFittedModel"' |
fittedParametersCovMatrix<--method | Class '"strumFittedModel"' |
formulas | Class '"strumVirtualModel"' |
formulas-method | Class '"strumVirtualModel"' |
formulas<- | Class '"strumVirtualModel"' |
formulas<--method | Class '"strumVirtualModel"' |
haplotypes | Class '"strumMarker"' |
haplotypes-method | Class '"strumMarker"' |
haplotypes<- | Class '"strumMarker"' |
haplotypes<--method | Class '"strumMarker"' |
ibd | Class '"strumData"' |
ibd-method | Class '"strumData"' |
ibdMarker | Class '"strumIBD"' |
ibdMarker-method | Class '"strumIBD"' |
ibdMarker<- | Class '"strumIBD"' |
ibdMarker<--method | Class '"strumIBD"' |
ibdMatrix | Class '"strumIBD"' |
ibdMatrix-method | Class '"strumIBD"' |
ibdMatrix<- | Class '"strumIBD"' |
ibdMatrix<--method | Class '"strumIBD"' |
importHapmapData | Import Hapmap Data |
importIBD | Class '"strumData"' |
importIBD-method | Class '"strumData"' |
intervalIBD | Class '"strumMarker"' |
intervalIBD-method | Class '"strumMarker"' |
intervalIBD<- | Class '"strumMarker"' |
intervalIBD<--method | Class '"strumMarker"' |
markerFacts | Class '"strumMarker"' |
markerFacts-method | Class '"strumMarker"' |
markerFacts<- | Class '"strumMarker"' |
markerFacts<--method | Class '"strumMarker"' |
markerInfo | Class '"strumSimModel"' |
markerInfo-method | Class '"strumSimModel"' |
markerInfo<- | Class '"strumSimModel"' |
markerInfo<--method | Class '"strumSimModel"' |
missingRate | Class '"strumMarker"' |
missingRate-method | Class '"strumMarker"' |
missingRate<- | Class '"strumMarker"' |
missingRate<--method | Class '"strumMarker"' |
mutationRate | Class '"strumMarker"' |
mutationRate-method | Class '"strumMarker"' |
mutationRate<- | Class '"strumMarker"' |
mutationRate<--method | Class '"strumMarker"' |
paramNames | Class '"strumVirtualModel"' |
paramNames-method | Class '"strumVirtualModel"' |
paramNames<- | Class '"strumVirtualModel"' |
paramNames<--method | Class '"strumVirtualModel"' |
phi | Class '"strumData"' |
phi-method | Class '"strumData"' |
phi<- | Class '"strumData"' |
phi<--method | Class '"strumData"' |
plot-method | Class '"strumModel"' |
plot-method | Class '"strumSimModel"' |
plot-method | Class '"strumVirtualModel"' |
populationRecombRate | Class '"strumMarker"' |
populationRecombRate-method | Class '"strumMarker"' |
populationRecombRate<- | Class '"strumMarker"' |
populationRecombRate<--method | Class '"strumMarker"' |
returnIBD | Class '"strumMarker"' |
returnIBD-method | Class '"strumMarker"' |
returnIBD<- | Class '"strumMarker"' |
returnIBD<--method | Class '"strumMarker"' |
show-method | Class '"strumData"' |
show-method | Class '"strumFittedModel"' |
show-method | Class '"strumIBD"' |
show-method | Class '"strumMarker"' |
show-method | Class '"strumModel"' |
show-method | Class '"strumSimModel"' |
show-method | Class '"strumVirtualModel"' |
simulateStrumData | Simulate strumData Object |
strum | STRUctural Modeling of Latent Variables for Family Data |
strumData-class | Class '"strumData"' |
strumFittedModel-class | Class '"strumFittedModel"' |
strumIBD-class | Class '"strumIBD"' |
strumMarker-class | Class '"strumMarker"' |
strumModel-class | Class '"strumModel"' |
strumSimModel-class | Class '"strumSimModel"' |
strumVirtualModel-class | Class '"strumVirtualModel"' |
traitMissingRate | Class '"strumSimModel"' |
traitMissingRate-method | Class '"strumSimModel"' |
traitMissingRate<- | Class '"strumSimModel"' |
traitMissingRate<--method | Class '"strumSimModel"' |
varList | Class '"strumVirtualModel"' |
varList-method | Class '"strumVirtualModel"' |
varList<- | Class '"strumVirtualModel"' |
varList<--method | Class '"strumVirtualModel"' |
$-method | Class '"strumData"' |
$<--method | Class '"strumData"' |
[-method | Class '"strumData"' |
[<--method | Class '"strumData"' |
[[-method | Class '"strumData"' |
[[<--method | Class '"strumData"' |