brca.tcga | A sample breast cancer gene differential expression analysis t statistic score data |
CEG.network.graph | Plot The Pathway-CEG Network for A Drug |
drug.ident | Dr. Insight Drug Identification |
drug.info | The matrix containing the drug instances information of CMap drug data |
example.disease | An example gene differential expression analysis test statistic score data |
example.drug.profiles | An example cmap drug reference profiles |
example.pathway | example.pathway |
get.cmap.ref | Read In and Process CMap Reference Profiles |
make.cytoscape.network | Drug and Pathway connection output files for Cytoscape visulization |
network.graph | Plot Drug and Pathway Interaction Network |
pathway.analysis | Drug Mechanism of Action Pathway Analysis |
pathway.PID | pathway.PID |
probe.to.genes | The matrix of Affymetrix probe IDs and gene symbols relationship |