SpatialEpi-package |
Methods and Data for Spatial Epidemiology |
bayes_cluster |
Bayesian Cluster Detection Method |
besag_newell |
Besag-Newell Cluster Detection Method |
coeff |
Compute log Bayes Factors |
create_geo_objects |
Create geographical objects to be used in Bayesian Cluster Detection Method |
eBayes |
Empirical Bayes Estimates of Relative Risk |
EBpostdens |
Produce plots of emprical Bayes posterior densities when the data Y are Poisson with expected number E and relative risk theta, with the latter having a gamma distribution with known values alpha and beta, which are estimated using empirical Bayes. |
EBpostthresh |
Produce the probabilities of exceeding a threshold given a posterior gamma distribution. |
expected |
Compute Expected Numbers of Disease |
GammaPriorCh |
Compute Parameters to Calibrate a Gamma Distribution |
kulldorff |
Kulldorff Cluster Detection Method |
latlong2grid |
Convert Coordinates from Latitude/Longitude to Grid |
ldmultinom |
log multinomial Density |
LogNormalPriorCh |
Compute Parameters to Calibrate a Log-normal Distribution |
mapvariable |
Plot Levels of a Variable in a Colour-Coded Map |
normalize |
Normalize vector to sum to 1. |
NumericVectorEquality |
Test if two numeric vectors are equal |
NYleukemia |
Upstate New York Leukemia Data |
pennLC |
Pennsylvania Lung Cancer |
plotmap |
Plot Levels of a Variable in a Colour-Coded Map |
polygon2spatial_polygon |
Convert a Polygon to a Spatial Polygons Object |
scotland |
Lip Cancer in Scotland |
SpatialEpi |
Methods and Data for Spatial Epidemiology |
zones |
Create set of all single zones and output geographical information |