gdm-package |
Overview of the functions in the gdm package |
formatsitepair |
Converts Common Biological (Response) and Environmental (Predictor) Data Formats to a GDM Site-Pair Table |
gdm |
Fit a Generalized Dissimilarity Model to Tabular Site-Pair Data |
gdm.transform |
Transform Environmental Data Using a Generalized Dissimilarity Model |
gdm.varImp |
Quantify model significance and variable importance/significance in gdm using matrix permutation. |
gdmDissim |
A sample biological dissimilarity matrix for use in GDM examples |
gdmExpData |
Species and environmental data used in GDM examples |
isplineExtract |
Extract I-spline Values From a gdm Object. |
plot |
Plot model fit and I-splines from a generalized dissimilarity model |
plot.gdm |
Plot model fit and I-splines from a generalized dissimilarity model |
plotUncertainty |
Plot I-splines with error bands using bootstrapping. |
predict |
Predict Biological Dissimilarities Between Sites or Times Using a Generalized Dissimilarity Model |
predict.gdm |
Predict Biological Dissimilarities Between Sites or Times Using a Generalized Dissimilarity Model |
removeSitesFromSitePair |
Remove Random Sites from Site-Pair Table |
stackedVars |
Worldclim climate variables used to fit GDM in examples |
summary |
Summarize a Fitted Generalized Dissimilarity Model |
summary.gdm |
Summarize a Fitted Generalized Dissimilarity Model |