anova.gllvm | Analysis Of Deviance for gllvm |
coefplot | Plot covariate coefficients and confidence intervals |
coefplot.gllvm | Plot covariate coefficients and confidence intervals |
confint.gllvm | Confidence intervals for model parameters |
getLV | Extract latent variables |
getLV.gllvm | Extract latent variables |
getPredictErr | Extract prediction errors for latent variables from gllvm object |
getPredictErr.gllvm | Extract prediction errors for latent variables from gllvm object |
getResidualCor | Extract residual correlations from gllvm object |
getResidualCor.gllvm | Extract residual correlations from gllvm object |
getResidualCov | Extract residual covariance matrix from gllvm object |
getResidualCov.gllvm | Extract residual covariance matrix from gllvm object |
gllvm | Generalized Linear Latent Variable Models |
logLik.gllvm | Log-likelihood of gllvm |
microbialdata | Microbial community data |
ordiplot | Plot latent variables from gllvm model |
ordiplot.gllvm | Plot latent variables from gllvm model |
plot.gllvm | Plot Diagnostics for an gllvm Object |
predict | Predict Method for gllvm Fits |
predict.gllvm | Predict Method for gllvm Fits |
predictLVs | Predict latent variables for gllvm Fits |
predictLVs.gllvm | Predict latent variables for gllvm Fits |
randomCoefplot | Plot random slope coefficients |
randomCoefplot.gllvm | Plot random slope coefficients |
residuals.gllvm | Dunn-Smyth residuals for gllvm model |
simulate | Simulate data from gllvm fit |
simulate.gllvm | Simulate data from gllvm fit |
sim_bacteria | Simulated bacteria data |
summary.gllvm | Summarizing gllvm model fits |