Model C3 Photosynthesis


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Documentation for package ‘photosynthesis’ version 1.0.0

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photosynthesis-package 'photosynthesis' package
.get_gbc Conductance to CO2 (umol / (m^2 s Pa))
.get_gmc Conductance to CO2 (umol / (m^2 s Pa))
.get_gsc Conductance to CO2 (umol / (m^2 s Pa))
.get_gtc Conductance to CO2 (umol / (m^2 s Pa))
.get_guc Conductance to CO2 (umol / (m^2 s Pa))
A_demand CO2 supply and demand function (mol / m^2 s)
A_supply CO2 supply and demand function (mol / m^2 s)
bake Leaf parameter temperature responses
baked-class S3 class baked
bake_par S3 class bake_par
CO2_conductance Conductance to CO2 (umol / (m^2 s Pa))
constants S3 class constants
enviro_par S3 class enviro_par
FvCB Farquhar-von Caemmerer-Berry (FvCB) C3 photosynthesis model
gc2gw Convert g_c (mumol CO2/m^2/s/Pa) to g_w (mumol H2O /m^2/s/Pa)
gw2gc Convert g_c (mumol CO2/m^2/s/Pa) to g_w (mumol H2O /m^2/s/Pa)
J J: Rate of electron transport (umol/m^2/s)
leaf_par S3 class leaf_par
make_bakepar Make lists of parameters for 'photosynthesis'
make_constants Make lists of parameters for 'photosynthesis'
make_enviropar Make lists of parameters for 'photosynthesis'
make_leafpar Make lists of parameters for 'photosynthesis'
make_parameters Make lists of parameters for 'photosynthesis'
parameter_names Get vector of parameter names
photo Simulate C3 photosynthesis
photosynthesis Simulate C3 photosynthesis
ppm2pa Convert pressure from PPM to Pascals
temp_resp1 Leaf parameter temperature responses
temp_resp2 Leaf parameter temperature responses
W_carbox Farquhar-von Caemmerer-Berry (FvCB) C3 photosynthesis model
W_regen Farquhar-von Caemmerer-Berry (FvCB) C3 photosynthesis model
W_tpu Farquhar-von Caemmerer-Berry (FvCB) C3 photosynthesis model