adjust_infection_to_report | Adjust from Case Counts by Infection Date to Date of Report |
bootstrapped_dist_fit | Fit a Subsampled Bootstrap to Integer Values and Summarise Distribution Parameters |
clean_nowcasts | Clean Nowcasts for a Supplied Date |
country_map | Generate a country map for a single variable. |
covid_generation_times | Covid Generation Time Estimates |
covid_incubation_period | Covid Incubation Period |
covid_serial_intervals | Covid Generation Serial Intervals |
dist_fit | Fit an Integer Adjusted Exponential, Gamma or Lognormal distributions |
dist_skel | Distribution Skeleton |
epinow | Real-time Rt Estimation, Forecasting and Reporting |
estimate_infections | Estimate Infections, the Time-Varying Reproduction Number and the Rate of Growth |
example_confirmed | Example Confirmed Case Data Set |
forecast_infections | Forecast Infections and the Time-Varying Reproduction Number |
gamma_dist_def | Generate a Gamma Distribution Definition Based on Parameter Estimates |
get_raw_result | Get a Single Raw Result |
get_regional_results | Get Combined Regional Results |
get_regions | Get Folders with Nowcast Results |
global_map | Generate a global map for a single variable. |
growth_to_R | Convert Growth Rates to Reproduction numbers. |
lognorm_dist_def | Generate a Log Normal Distribution Definition Based on Parameter Estimates |
make_conf | Format Credible Intervals |
map_prob_change | Categorise the Probability of Change for Rt |
plot_estimates | Plot Estimates |
plot_summary | Plot a Summary of the Latest Results |
regional_epinow | Real-time Rt Estimation, Forecasting and Reporting by Region |
regional_summary | Generate Regional Summary Output |
report_cases | Report case counts by date of report |
report_plots | Report plots |
report_summary | Provide Summary Statistics for Estimated Infections and Rt |
R_to_growth | Convert Reproduction Numbers to Growth Rates |
sample_approx_dist | Approximate Sampling a Distribution using Counts |
simulate_cases | Simulate Cases by Date of Infection, Onset and Report |
summarise_key_measures | Summarise rt and cases |
summarise_results | Summarise Real-time Results |
theme_map | Custom Map Theme |