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| EpiEstim-package | The EpiEstim package |
| DiscrSI | Discretized Generation Time Distribution Assuming A Shifted Gamma Distribution |
| EpiEstim | The EpiEstim package |
| EstimateR | Estimation of the instantaneous reproduction number |
| Flu1918 | Data on the 1918 H1N1 influenza pandemic in Baltimore |
| Flu2009 | Data on the 2009 H1N1 influenza pandemic in a school in Pennsylvania |
| Measles1861 | Data on the 1861 measles epidemic in Hagelloch, Germany |
| OverallInfectivity | Overall Infectivity Due To Previously Infected Individuals |
| SARS2003 | Data on the 2003 SARS epidemic in Hong Kong |
| Smallpox1972 | Data on the 1972 smallpox epidemic in Kosovo |
| WT | Estimation of the case reproduction number using the Wallinga and Teunis method |