Systematic Analysis of Architectural Proteins and Functional Elements in Blocking Long-Range Contacts Between Loci


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Documentation for package ‘HiCblock’ version 1.4

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HiCblock-package Systematic Analysis of Architectural Proteins and Functional Elements in Blocking Long-Range Contacts Between Loci
annotateHiCBin Annotate blocking regions with ChIP-seq data.
createHiCDataset Create a dataset for further processing with the R package.
dataExample Hi-C matrix and ChIP-seq peaks.
HiCblock Systematic Analysis of Architectural Proteins and Functional Elements in Blocking Long-Range Contacts Between Loci
HiCblockModel The model.
HiCblockProcData Process data for further generalized linear regression.
testDistancePowerLawDistrib Check log-log linear relation between distance and Hi-C count.