Mendelian Randomization Package


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Documentation for package ‘MendelianRandomization’ version 0.4.1

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calc.rho Data on effect of calcium on fasting glucose (correlated variants)
calcium Data on effect of calcium on fasting glucose (correlated variants)
calciumse Data on effect of calcium on fasting glucose (correlated variants)
chdlodds Data on lipid effects on coronary artery disease (uncorrelated variants)
chdloddsse Data on lipid effects on coronary artery disease (uncorrelated variants)
Egger-class Egger Class
extract.pheno.csv Extract summarized data from a PhenoScanner .csv file (legacy)
fastgluc Data on effect of calcium on fasting glucose (correlated variants)
fastglucse Data on effect of calcium on fasting glucose (correlated variants)
hdlc Data on lipid effects on coronary artery disease (uncorrelated variants)
hdlcse Data on lipid effects on coronary artery disease (uncorrelated variants)
IVW-class IVW Class
ldlc Data on lipid effects on coronary artery disease (uncorrelated variants)
ldlcse Data on lipid effects on coronary artery disease (uncorrelated variants)
lipid_eaf Data on lipid effects on coronary artery disease (uncorrelated variants)
lipid_effect Data on lipid effects on coronary artery disease (uncorrelated variants)
lipid_other Data on lipid effects on coronary artery disease (uncorrelated variants)
MaxLik-class MaxLik Class
MRAll-class MRAll Class
MRConMix-class MRConMix Class
MRHetPen-class MRHetPen Class
MRInput-class MRInput Class
MRMBE-class MRMBE Class
MRMVInput-class MRMVInput Class
mr_allmethods Mendelian randomization estimation using all methods
mr_allmethods-method Mendelian randomization estimation using all methods
mr_conmix Contamination mixture method
mr_conmix-method Contamination mixture method
mr_egger MR-Egger method
mr_egger-method MR-Egger method
mr_hetpen Heterogeneity-penalized method
mr_hetpen-method Heterogeneity-penalized method
mr_input Inputting and formatting data for use in causal estimation
mr_ivw Inverse-variance weighted method
mr_ivw-method Inverse-variance weighted method
mr_maxlik Maximum-likelihood method
mr_maxlik-method Maximum-likelihood method
mr_mbe Mode-based method of Hartwig
mr_mbe-method Mode-based method of Hartwig
mr_median Median-based method
mr_median-method Median-based method
mr_mvegger Multivariable MR-Egger method
mr_mvegger-method Multivariable MR-Egger method
mr_mvinput Inputting and formatting data for use in causal estimation
mr_mvivw Multivariable inverse-variance weighted method
mr_mvivw-method Multivariable inverse-variance weighted method
mr_plot Draw a scatter plot of the genetic associations and/or causal estimates
mr_plot-method Draw a scatter plot of the genetic associations and/or causal estimates
MVEgger-class MVEgger Class
MVIVW-class MVIVW Class
phenoscanner PhenoScanner
pheno_input Extract summarized data from PhenoScanner
trig Data on lipid effects on coronary artery disease (uncorrelated variants)
trigse Data on lipid effects on coronary artery disease (uncorrelated variants)
WeightedMedian-class WeightedMedian Class