TmCalculator-package |
Melting Temperature of Nucleic Acid Sequences |
c2s |
convert a vector of characters into a string |
check_filter |
Check and filter valid base of nucleotide sequences |
chem_correction |
Correct melting temperature with chemical substances |
complement |
reverse complement and complement base of nucleotide sequences |
GC |
Calculate G and C content of nucleotide sequences |
s2c |
convert a string into a vector of characters |
salt_correction |
Calculate the corrected melting temperature with salt ions |
TmCalculator |
Melting Temperature of Nucleic Acid Sequences |
Tm_GC |
Calculate the melting temperature using empirical formulas based on GC content |
Tm_NN |
Calculate melting temperature using nearest neighbor thermodynamics |
Tm_Wallace |
Calculate the melting temperature using the 'Wallace rule' |