* using log directory 'd:/Rcompile/CRANpkg/local/3.4/MAc.Rcheck' * using R version 3.4.4 (2018-03-15) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'MAc/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'MAc' version '1.1.1' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'MAc' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE 'library' or 'require' calls in package code: 'R2wd' 'ggplot2' 'metafor' Please use :: or requireNamespace() instead. See section 'Suggested packages' in the 'Writing R Extensions' manual. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [12s] NOTE CatModf: warning in pchisq(out$Q, out$df, lower = FALSE): partial argument match of 'lower' to 'lower.tail' CatModr: warning in pchisq(out$Q, out$df, lower = FALSE): partial argument match of 'lower' to 'lower.tail' OmnibusES: warning in pchisq(Q, df, lower = FALSE): partial argument match of 'lower' to 'lower.tail' macat: warning in pchisq(temp$Q, temp$df, lower = FALSE): partial argument match of 'lower' to 'lower.tail' macat: warning in pchisq(out$Q, out$df, lower = FALSE): partial argument match of 'lower' to 'lower.tail' omni: warning in pchisq(Q, df, lower = FALSE): partial argument match of 'lower' to 'lower.tail' CatModGraph: no visible global function definition for 'ggplot' CatModGraph: no visible global function definition for 'aes' CatModGraph: no visible binding for global variable 'z' CatModGraph: no visible binding for global variable 'wi' CatModGraph: no visible global function definition for 'geom_boxplot' CatModGraph: no visible global function definition for 'geom_jitter' CatModGraph: no visible binding for global variable 'wi.tau' CatModGraph: no visible global function definition for 'xlab' CatModGraph: no visible global function definition for 'ylab' CatModGraph: no visible global function definition for 'opts' ForestPlot: no visible global function definition for 'ggplot' ForestPlot: no visible global function definition for 'aes' ForestPlot: no visible binding for global variable 'id' ForestPlot: no visible binding for global variable 'r' ForestPlot: no visible global function definition for 'geom_vline' ForestPlot: no visible global function definition for 'geom_point' ForestPlot: no visible global function definition for 'opts' ForestPlot: no visible global function definition for 'geom_errorbarh' ForestPlot: no visible binding for global variable 'l.ci95' ForestPlot: no visible binding for global variable 'u.ci95' ForestPlot: no visible global function definition for 'xlim' ForestPlot: no visible global function definition for 'xlab' ForestPlot: no visible global function definition for 'ylab' FunnelPlot: no visible global function definition for 'ggplot' FunnelPlot: no visible global function definition for 'aes' FunnelPlot: no visible binding for global variable 'se.z' FunnelPlot: no visible binding for global variable 'z' FunnelPlot: no visible global function definition for 'geom_vline' FunnelPlot: no visible global function definition for 'opts' FunnelPlot: no visible global function definition for 'xlim' FunnelPlot: no visible global function definition for 'ylim' FunnelPlot: no visible global function definition for 'xlab' FunnelPlot: no visible global function definition for 'ylab' FunnelPlot: no visible global function definition for 'stat_abline' FunnelPlot: no visible global function definition for 'scale_y_continuous' FunnelPlot: no visible binding for global variable 'se.z.tau' MAregGraph: no visible global function definition for 'ggplot' MAregGraph: no visible global function definition for 'aes' MAregGraph: no visible binding for global variable 'z' MAregGraph: no visible binding for global variable 'wi' MAregGraph: no visible global function definition for 'geom_point' MAregGraph: no visible global function definition for 'geom_smooth' MAregGraph: no visible global function definition for 'xlab' MAregGraph: no visible global function definition for 'ylab' MAregGraph: no visible global function definition for 'opts' MAregGraph: no visible binding for global variable 'wi.tau' MultiModGraph: no visible global function definition for 'ggplot' MultiModGraph: no visible global function definition for 'aes' MultiModGraph: no visible binding for global variable 'z' MultiModGraph: no visible binding for global variable 'wi' MultiModGraph: no visible global function definition for 'opts' MultiModGraph: no visible global function definition for 'facet_wrap' MultiModGraph: no visible global function definition for 'geom_point' MultiModGraph: no visible global function definition for 'geom_smooth' MultiModGraph: no visible global function definition for 'ylab' MultiModGraph: no visible global function definition for 'xlab' MultiModGraph: no visible binding for global variable 'wi.tau' mareg.default: no visible global function definition for 'rma' omni: no visible binding for global variable 'g' omni: no visible binding for global variable 'var.g' plotcat: no visible global function definition for 'ggplot' plotcat: no visible global function definition for 'aes' plotcat: no visible binding for global variable 'wi' plotcat: no visible global function definition for 'geom_boxplot' plotcat: no visible global function definition for 'geom_jitter' plotcat: no visible binding for global variable 'wi.tau' plotcat: no visible global function definition for 'xlab' plotcat: no visible global function definition for 'ylab' plotcat: no visible global function definition for 'opts' plotcon: no visible global function definition for 'ggplot' plotcon: no visible global function definition for 'aes' plotcon: no visible binding for global variable 'wi' plotcon: no visible global function definition for 'geom_point' plotcon: no visible global function definition for 'geom_smooth' plotcon: no visible global function definition for 'xlab' plotcon: no visible global function definition for 'ylab' plotcon: no visible global function definition for 'opts' plotcon: no visible binding for global variable 'wi.tau' stat_sum_single1: no visible binding for global variable 'wi' stat_sum_single1: no visible global function definition for 'stat_summary' stat_sum_single2: no visible binding for global variable 'wi.tau' stat_sum_single2: no visible global function definition for 'stat_summary' wd.default: no visible global function definition for 'wdGet' wd.default: no visible global function definition for 'wdNewDoc' wd.default: no visible global function definition for 'wdHeading' wd.default: no visible global function definition for 'wdTable' wd.macat: no visible global function definition for 'wdGet' wd.macat: no visible global function definition for 'wdNewDoc' wd.macat: no visible global function definition for 'wdHeading' wd.macat: no visible global function definition for 'wdTable' wd.mareg: no visible global function definition for 'wdGet' wd.mareg: no visible global function definition for 'wdNewDoc' wd.mareg: no visible global function definition for 'wdHeading' wd.mareg: no visible global function definition for 'wdTable' wd.omni: no visible global function definition for 'wdGet' wd.omni: no visible global function definition for 'wdNewDoc' wd.omni: no visible global function definition for 'wdHeading' wd.omni: no visible global function definition for 'wdTable' Undefined global functions or variables: aes facet_wrap g geom_boxplot geom_errorbarh geom_jitter geom_point geom_smooth geom_vline ggplot id l.ci95 opts r rma scale_y_continuous se.z se.z.tau stat_abline stat_summary u.ci95 var.g wdGet wdHeading wdNewDoc wdTable wi wi.tau xlab xlim ylab ylim z * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking examples ... [3s] OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs