* using log directory 'd:/Rcompile/CRANpkg/local/3.4/MSeasyTkGUI.Rcheck' * using R version 3.4.4 (2018-03-15) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'MSeasyTkGUI/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'MSeasyTkGUI' version '5.3.3' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'MSeasyTkGUI' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE 'library' or 'require' calls to packages already attached by Depends: 'MSeasy' 'tcltk' Please remove these calls from your code. 'library' or 'require' calls in package code: 'grDevices' 'xcms' Please use :: or requireNamespace() instead. See section 'Suggested packages' in the 'Writing R Extensions' manual. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [18s] NOTE MSeasyTkGUI : : no visible global function definition for 'help' choosepackage: no visible global function definition for 'data' choosepackage : : no visible global function definition for 'help' dialog.MS.DataCreation.ASCII : : no visible global function definition for 'help' dialog.MS.DataCreation.Agilent: no visible global function definition for 'download.file' dialog.MS.DataCreation.Agilent: no visible global function definition for 'unzip' dialog.MS.DataCreation.Agilent : : no visible global function definition for 'help' dialog.MS.DataCreation.CDF: no visible global function definition for 'download.file' dialog.MS.DataCreation.CDF: no visible global function definition for 'unzip' dialog.MS.DataCreation.CDF : : no visible global function definition for 'help' dialog.MS.DataCreation.user : : no visible global function definition for 'help' dialog.MS.aristo : : no visible global function definition for 'help' dialog.MS.clust: no visible binding for global variable 'Agilent_quantF_MSclust' dialog.MS.clust : : no visible global function definition for 'help' dialog.MS.demon : : no visible global function definition for 'help' dialog.MS.msp : : no visible global function definition for 'help' dialog.MS.nist : : no visible global function definition for 'help' dialog.MS.step1 : : no visible global function definition for 'help' dialog.MS.step2 : : no visible global function definition for 'help' dialog.MS.step3 : : no visible global function definition for 'help' dialog.MS.test.clust: no visible binding for global variable 'Data_testclust' dialog.MS.test.clust : : no visible global function definition for 'help' Undefined global functions or variables: Agilent_quantF_MSclust Data_testclust data download.file help unzip Consider adding importFrom("utils", "data", "download.file", "help", "unzip") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking examples ... [9s] OK * checking PDF version of manual ... OK * DONE Status: 3 NOTEs