* using log directory 'd:/Rcompile/CRANpkg/local/3.4/arulesSequences.Rcheck' * using R version 3.4.4 (2018-03-15) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'arulesSequences/DESCRIPTION' ... OK * this is package 'arulesSequences' version '0.2-22' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'arulesSequences' can be installed ... OK * checking installed package size ... NOTE installed size is 14.8Mb sub-directories of 1Mb or more: bin 12.0Mb misc 2.1Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [13s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking compiled code ... OK * checking examples ... ** running examples for arch 'i386' ... [14s] OK ** running examples for arch 'x64' ... [16s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... [25s] OK Running 'Rgui.R' [2s] Running 'arules.R' [2s] Comparing 'arules.Rout' to 'arules.Rout.save' ... OK Running 'idlists.R' [2s] Comparing 'idlists.Rout' to 'idlists.Rout.save' ...71c71,72 < preprocessing ... P [0s] --- > preprocessing ... P [0.004s] > counting ... 2 sequence(s), processed 0/1 join(s) [0.00s] Running 'makebin.R' [2s] Comparing 'makebin.Rout' to 'makebin.Rout.save' ... OK Running 'native.R' [2s] Comparing 'native.Rout' to 'native.Rout.save' ... OK Running 'ptree.R' [9s] Comparing 'ptree.Rout' to 'ptree.Rout.save' ...31,33c31,33 < preprocessing ... 1 partition(s), 0 MB [0.03s] < mining transactions ... 0.12 MB [0.05s] < reading sequences ... [1.0s] --- > preprocessing ... 1 partition(s), 0 MB [0.014s] > mining transactions ... 0.11 MB [0.03s] > reading sequences ... [1s] 35c35 < total elapsed time: 1.13s --- > total elapsed time: 1.05s 38c38,41 < preprocessing ... [0.01s] --- > preprocessing ... [0.02s] > preparing ... 3917 sequences, created 4199 (0.09) nodes [0.00s] > counting ... 10 transactions (4), processed 4908 (0.86, 0.04) nodes [0.00s] > writing ... 3917 counts, processed 51210 (0.65) nodes [0.00s] 48,51d50 < > ## < > ## Remove eventually. < > suppressWarnings(RNGversion("3.5.0")) < > ## 94,96c93,95 < preprocessing ... 1 partition(s), 0.35 MB [0.06s] < mining transactions ... 0.31 MB [0.59s] < reading sequences ... [2.5s] --- > preprocessing ... 1 partition(s), 0.35 MB [0.039s] > mining transactions ... 0.3 MB [0.48s] > reading sequences ... [1.8s] 98c97 < total elapsed time: 3.12s --- > total elapsed time: 2.354s 137c136,139 < preprocessing ... [0.16s] --- > preprocessing ... [0.032s] > preparing ... 8616 sequences, created 11328 (0.08) nodes [0.00s] > counting ... 15391 transactions (1000), processed 37628159 (0.07, 0.29) nodes [0.34s] > writing ... 8616 counts, processed 154653 (0.55) nodes [0.00s] 153a156,158 > preparing ... 8616 sequences, created 11328 (0.08) nodes [0.00s] > counting ... 46821 transactions (8616), processed 1139646 (0.37, 0.11) nodes [0.01s] > writing ... 8616 counts, processed 154653 (0.55) nodes [0.00s] 160a166 > checking ... 8616 counts [0.02s, 0.01s] 168a175 > checking ... 8616 counts [0.02s, 0.01s] Running 'similarity.R' [3s] Comparing 'similarity.Rout' to 'similarity.Rout.save' ... OK Running 'zaki.R' [3s] Comparing 'zaki.Rout' to 'zaki.Rout.save' ...46,48c46,48 < preprocessing ... 1 partition(s), 0 MB [0.02s] < mining transactions ... 0 MB [0.03s] < reading sequences ... [0.01s] --- > preprocessing ... 1 partition(s), 0 MB [0.014s] > mining transactions ... 0 MB [0.006s] > reading sequences ... [0.036s] 50c50 < total elapsed time: 0.06s --- > total elapsed time: 0.056s 457,458c457,458 < preprocessing ... 1 partition(s), 0 MB [0.01s] < mining transactions ... 0 MB [0.02s] --- > preprocessing ... 1 partition(s), 0 MB [0.008s] > mining transactions ... 0 MB [0.005s] 461c461 < total elapsed time: 0.04s --- > total elapsed time: 0.023s 484,486c484,486 < preprocessing ... 1 partition(s), 0 MB [0.1s] < mining transactions ... 0 MB [0.01s] < reading sequences ... [0.02s] --- > preprocessing ... 1 partition(s), 0 MB [0.008s] > mining transactions ... 0 MB [0.005s] > reading sequences ... [0.016s] 488c488 < total elapsed time: 0.13s --- > total elapsed time: 0.029s ** running tests for arch 'x64' ... [29s] OK Running 'Rgui.R' [3s] Running 'arules.R' [2s] Comparing 'arules.Rout' to 'arules.Rout.save' ... OK Running 'idlists.R' [2s] Comparing 'idlists.Rout' to 'idlists.Rout.save' ...71c71,72 < preprocessing ... P [0.01s] --- > preprocessing ... P [0.004s] > counting ... 2 sequence(s), processed 0/1 join(s) [0.00s] Running 'makebin.R' [3s] Comparing 'makebin.Rout' to 'makebin.Rout.save' ... OK Running 'native.R' [2s] Comparing 'native.Rout' to 'native.Rout.save' ... OK Running 'ptree.R' [8s] Comparing 'ptree.Rout' to 'ptree.Rout.save' ...31,33c31,33 < preprocessing ... 1 partition(s), 0 MB [0.04s] < mining transactions ... 0.12 MB [0.03s] < reading sequences ... [1.3s] --- > preprocessing ... 1 partition(s), 0 MB [0.014s] > mining transactions ... 0.11 MB [0.03s] > reading sequences ... [1s] 35c35 < total elapsed time: 1.33s --- > total elapsed time: 1.05s 38c38,41 < preprocessing ... [0.03s] --- > preprocessing ... [0.02s] > preparing ... 3917 sequences, created 4199 (0.09) nodes [0.00s] > counting ... 10 transactions (4), processed 4908 (0.86, 0.04) nodes [0.00s] > writing ... 3917 counts, processed 51210 (0.65) nodes [0.00s] 48,51d50 < > ## < > ## Remove eventually. < > suppressWarnings(RNGversion("3.5.0")) < > ## 94,96c93,95 < preprocessing ... 1 partition(s), 0.35 MB [0.06s] < mining transactions ... 0.31 MB [0.3s] < reading sequences ... [2.3s] --- > preprocessing ... 1 partition(s), 0.35 MB [0.039s] > mining transactions ... 0.3 MB [0.48s] > reading sequences ... [1.8s] 98c97 < total elapsed time: 2.7s --- > total elapsed time: 2.354s 137c136,139 < preprocessing ... [0.11s] --- > preprocessing ... [0.032s] > preparing ... 8616 sequences, created 11328 (0.08) nodes [0.00s] > counting ... 15391 transactions (1000), processed 37628159 (0.07, 0.29) nodes [0.34s] > writing ... 8616 counts, processed 154653 (0.55) nodes [0.00s] 153a156,158 > preparing ... 8616 sequences, created 11328 (0.08) nodes [0.00s] > counting ... 46821 transactions (8616), processed 1139646 (0.37, 0.11) nodes [0.01s] > writing ... 8616 counts, processed 154653 (0.55) nodes [0.00s] 160a166 > checking ... 8616 counts [0.02s, 0.01s] 168a175 > checking ... 8616 counts [0.02s, 0.01s] Running 'similarity.R' [3s] Comparing 'similarity.Rout' to 'similarity.Rout.save' ... OK Running 'zaki.R' [5s] Comparing 'zaki.Rout' to 'zaki.Rout.save' ...46,48c46,48 < preprocessing ... 1 partition(s), 0 MB [0.03s] < mining transactions ... 0 MB [0.01s] < reading sequences ... [0.07s] --- > preprocessing ... 1 partition(s), 0 MB [0.014s] > mining transactions ... 0 MB [0.006s] > reading sequences ... [0.036s] 50c50 < total elapsed time: 0.11s --- > total elapsed time: 0.056s 457,458c457,458 < preprocessing ... 1 partition(s), 0 MB [0.03s] < mining transactions ... 0 MB [0s] --- > preprocessing ... 1 partition(s), 0 MB [0.008s] > mining transactions ... 0 MB [0.005s] 461c461 < total elapsed time: 0.04s --- > total elapsed time: 0.023s 484,486c484,486 < preprocessing ... 1 partition(s), 0 MB [0.03s] < mining transactions ... 0 MB [0s] < reading sequences ... [0.02s] --- > preprocessing ... 1 partition(s), 0 MB [0.008s] > mining transactions ... 0 MB [0.005s] > reading sequences ... [0.016s] 488c488 < total elapsed time: 0.05s --- > total elapsed time: 0.029s * checking PDF version of manual ... OK * DONE Status: 1 NOTE