* using log directory 'd:/Rcompile/CRANpkg/local/3.4/cluster.Rcheck' * using R version 3.4.4 (2018-03-15) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'cluster/DESCRIPTION' ... OK * this is package 'cluster' version '2.0.8' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'cluster' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [9s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... OK * checking examples ... ** running examples for arch 'i386' ... [6s] OK ** running examples for arch 'x64' ... [5s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... [73s] OK Running 'agnes-ex.R' [2s] Comparing 'agnes-ex.Rout' to 'agnes-ex.Rout.save' ...456,459c456,459 < $ diss :Classes 'dissimilarity', 'dist' atomic [1:2775] 11 12 29 13 25 43 33 22 27 39 ... < .. ..- attr(*, "Size")= int 75 < .. ..- attr(*, "Metric")= chr "manhattan" < .. ..- attr(*, "Labels")= chr [1:75] "1" "2" "3" "4" ... --- > $ diss : 'dissimilarity' num [1:2775] 11 12 29 13 25 43 33 22 27 39 ... > ..- attr(*, "Size")= int 75 > ..- attr(*, "Metric")= chr "manhattan" > ..- attr(*, "Labels")= chr [1:75] "1" "2" "3" "4" ... Running 'clara-NAs.R' [0s] Comparing 'clara-NAs.Rout' to 'clara-NAs.Rout.save' ... OK Running 'clara-ex.R' [2s] Running 'clara.R' [4s] Comparing 'clara.Rout' to 'clara.Rout.save' ... OK Running 'clusplot-out.R' [1s] Comparing 'clusplot-out.Rout' to 'clusplot-out.Rout.save' ... OK Running 'daisy-ex.R' [1s] Comparing 'daisy-ex.Rout' to 'daisy-ex.Rout.save' ...25,27c25,27 < Classes 'dissimilarity', 'dist' atomic (0) < ..- attr(*, "Size")= int 1 < ..- attr(*, "Metric")= chr "euclidean" --- > 'dissimilarity' num(0) > - attr(*, "Size")= int 1 > - attr(*, "Metric")= chr "euclidean" 37,39c37,39 < Classes 'dissimilarity', 'dist' atomic (0) < ..- attr(*, "Size")= int 0 < ..- attr(*, "Metric")= chr "euclidean" --- > 'dissimilarity' num(0) > - attr(*, "Size")= int 0 > - attr(*, "Metric")= chr "euclidean" Running 'diana-boots.R' [2s] Running 'diana-ex.R' [1s] Comparing 'diana-ex.Rout' to 'diana-ex.Rout.save' ...414,417c414,417 < $ diss :Classes 'dissimilarity', 'dist' atomic [1:2775] 11 12 29 13 25 43 33 22 27 39 ... < .. ..- attr(*, "Size")= int 75 < .. ..- attr(*, "Metric")= chr "manhattan" < .. ..- attr(*, "Labels")= chr [1:75] "1" "2" "3" "4" ... --- > $ diss : 'dissimilarity' num [1:2775] 11 12 29 13 25 43 33 22 27 39 ... > ..- attr(*, "Size")= int 75 > ..- attr(*, "Metric")= chr "manhattan" > ..- attr(*, "Labels")= chr [1:75] "1" "2" "3" "4" ... Running 'ellipsoid-ex.R' [0s] Comparing 'ellipsoid-ex.Rout' to 'ellipsoid-ex.Rout.save' ... OK Running 'fanny-ex.R' [1s] Running 'mona.R' [1s] Comparing 'mona.Rout' to 'mona.Rout.save' ... OK Running 'pam.R' [55s] Comparing 'pam.Rout' to 'pam.Rout.save' ... OK Running 'silhouette-default.R' [3s] Comparing 'silhouette-default.Rout' to 'silhouette-default.Rout.save' ... OK Running 'sweep-ex.R' [0s] Running 'withAutoprint.R' [0s] ** running tests for arch 'x64' ... [77s] OK Running 'agnes-ex.R' [2s] Comparing 'agnes-ex.Rout' to 'agnes-ex.Rout.save' ...456,459c456,459 < $ diss :Classes 'dissimilarity', 'dist' atomic [1:2775] 11 12 29 13 25 43 33 22 27 39 ... < .. ..- attr(*, "Size")= int 75 < .. ..- attr(*, "Metric")= chr "manhattan" < .. ..- attr(*, "Labels")= chr [1:75] "1" "2" "3" "4" ... --- > $ diss : 'dissimilarity' num [1:2775] 11 12 29 13 25 43 33 22 27 39 ... > ..- attr(*, "Size")= int 75 > ..- attr(*, "Metric")= chr "manhattan" > ..- attr(*, "Labels")= chr [1:75] "1" "2" "3" "4" ... Running 'clara-NAs.R' [0s] Comparing 'clara-NAs.Rout' to 'clara-NAs.Rout.save' ... OK Running 'clara-ex.R' [2s] Running 'clara.R' [4s] Comparing 'clara.Rout' to 'clara.Rout.save' ... OK Running 'clusplot-out.R' [1s] Comparing 'clusplot-out.Rout' to 'clusplot-out.Rout.save' ... OK Running 'daisy-ex.R' [1s] Comparing 'daisy-ex.Rout' to 'daisy-ex.Rout.save' ...25,27c25,27 < Classes 'dissimilarity', 'dist' atomic (0) < ..- attr(*, "Size")= int 1 < ..- attr(*, "Metric")= chr "euclidean" --- > 'dissimilarity' num(0) > - attr(*, "Size")= int 1 > - attr(*, "Metric")= chr "euclidean" 37,39c37,39 < Classes 'dissimilarity', 'dist' atomic (0) < ..- attr(*, "Size")= int 0 < ..- attr(*, "Metric")= chr "euclidean" --- > 'dissimilarity' num(0) > - attr(*, "Size")= int 0 > - attr(*, "Metric")= chr "euclidean" Running 'diana-boots.R' [2s] Running 'diana-ex.R' [0s] Comparing 'diana-ex.Rout' to 'diana-ex.Rout.save' ...414,417c414,417 < $ diss :Classes 'dissimilarity', 'dist' atomic [1:2775] 11 12 29 13 25 43 33 22 27 39 ... < .. ..- attr(*, "Size")= int 75 < .. ..- attr(*, "Metric")= chr "manhattan" < .. ..- attr(*, "Labels")= chr [1:75] "1" "2" "3" "4" ... --- > $ diss : 'dissimilarity' num [1:2775] 11 12 29 13 25 43 33 22 27 39 ... > ..- attr(*, "Size")= int 75 > ..- attr(*, "Metric")= chr "manhattan" > ..- attr(*, "Labels")= chr [1:75] "1" "2" "3" "4" ... Running 'ellipsoid-ex.R' [1s] Comparing 'ellipsoid-ex.Rout' to 'ellipsoid-ex.Rout.save' ... OK Running 'fanny-ex.R' [1s] Running 'mona.R' [1s] Comparing 'mona.Rout' to 'mona.Rout.save' ... OK Running 'pam.R' [59s] Comparing 'pam.Rout' to 'pam.Rout.save' ... OK Running 'silhouette-default.R' [3s] Comparing 'silhouette-default.Rout' to 'silhouette-default.Rout.save' ... OK Running 'sweep-ex.R' [0s] Running 'withAutoprint.R' [0s] * checking PDF version of manual ... OK * DONE Status: OK