* using log directory 'd:/Rcompile/CRANpkg/local/3.4/coin.Rcheck' * using R version 3.4.4 (2018-03-15) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'coin/DESCRIPTION' ... OK * this is package 'coin' version '1.3-0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'coin' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [17s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking compiled code ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... [32s] OK ** checking differences from 'coin-Ex_i386.Rout' to 'coin-Ex.Rout.save' ... OK 3a4 > > base::assign(".old_wd", base::getwd(), pos = 'CheckExEnv') 1111c1112 < maxT = 2.9983, p-value = 0.007715 --- > maxT = 2.9983, p-value = 0.007662 Warning message: running command 'diff -bw "D:\temp\RtmpS2lcWY\Rdiffa1651c1ab1ffd" "D:\temp\RtmpS2lcWY\Rdiffb1651c3e842690"' had status 1 ** running examples for arch 'x64' ... [22s] OK ** checking differences from 'coin-Ex_x64.Rout' to 'coin-Ex.Rout.save' ... OK 3a4 > > base::assign(".old_wd", base::getwd(), pos = 'CheckExEnv') Warning message: running command 'diff -bw "D:\temp\RtmpiwXPwb\Rdiffae85828d87e1d" "D:\temp\RtmpiwXPwb\Rdiffbe8581d145345"' had status 1 * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... [64s] OK Running 'bugfixes.R' [6s] Comparing 'bugfixes.Rout' to 'bugfixes.Rout.save' ...875c875 < Error in fligner_test.IndependenceProblem(object = ) : --- > Error in fligner_test.IndependenceProblem(object = new("IndependenceProblem", : 878c878 < Error in conover_test.IndependenceProblem(object = ) : --- > Error in conover_test.IndependenceProblem(object = new("IndependenceProblem", : 881c881 < Error in sign_test.SymmetryProblem(object = ) : --- > Error in sign_test.SymmetryProblem(object = new("SymmetryProblem", x = structure(list( : 891c891 < Error in wilcoxsign_test.SymmetryProblem(object = ) : --- > Error in wilcoxsign_test.SymmetryProblem(object = new("SymmetryProblem", : 905c905 < Error in quade_test.SymmetryProblem(object = ) : --- > Error in quade_test.SymmetryProblem(object = new("SymmetryProblem", x = structure(list( : Running 'comparisons.R' [5s] Comparing 'comparisons.Rout' to 'comparisons.Rout.save' ... OK Running 'regtest_2sample.R' [5s] Comparing 'regtest_2sample.Rout' to 'regtest_2sample.Rout.save' ...549c549 < 10.99994 --- > 10.99993 740c740 < 1.166667 --- > 1.221264 747c747 < 1.166667 --- > 1.221264 757c757 < 1.166667 --- > 1.221264 766c766 < 1.166688 --- > 1.275789 Running 'regtest_Ksample.R' [3s] Comparing 'regtest_Ksample.Rout' to 'regtest_Ksample.Rout.save' ...62c62 < Error in fligner_test.IndependenceProblem(object = ) : --- > Error in fligner_test.IndependenceProblem(object = new("IndependenceProblem", : Running 'regtest_MTP.R' [7s] Comparing 'regtest_MTP.Rout' to 'regtest_MTP.Rout.save' ... OK Running 'regtest_contingency.R' [5s] Comparing 'regtest_contingency.Rout' to 'regtest_contingency.Rout.save' ...118c118 < maxT = 2.3738, p-value = 0.182 --- > maxT = 2.3738, p-value = 0.184 165c165 < maxT = 2.3738, p-value = 0.2863 --- > maxT = 2.3738, p-value = 0.286 Running 'regtest_correlation.R' [2s] Comparing 'regtest_correlation.Rout' to 'regtest_correlation.Rout.save' ... OK Running 'regtest_distribution.R' [9s] Comparing 'regtest_distribution.Rout' to 'regtest_distribution.Rout.save' ... OK Running 'regtest_helpers.R' [3s] Comparing 'regtest_helpers.Rout' to 'regtest_helpers.Rout.save' ... OK Running 'regtest_midpvalue.R' [4s] Comparing 'regtest_midpvalue.Rout' to 'regtest_midpvalue.Rout.save' ... OK Running 'regtest_names.R' [6s] Comparing 'regtest_names.Rout' to 'regtest_names.Rout.save' ... OK Running 'regtest_size.R' [5s] Comparing 'regtest_size.Rout' to 'regtest_size.Rout.save' ... OK Running 'regtest_trafo.R' [3s] Comparing 'regtest_trafo.Rout' to 'regtest_trafo.Rout.save' ...35c35 < [1] -1.067571e+00 -5.659488e-01 NA -6.938894e-17 -6.938894e-17 --- > [1] -1.067571e+00 -5.659488e-01 NA -8.326673e-17 -8.326673e-17 38c38 < [1] -1.067571e+00 -5.659488e-01 -6.938894e-17 -6.938894e-17 5.659488e-01 --- > [1] -1.067571e+00 -5.659488e-01 -8.326673e-17 -8.326673e-17 5.659488e-01 ** running tests for arch 'x64' ... [68s] OK Running 'bugfixes.R' [7s] Comparing 'bugfixes.Rout' to 'bugfixes.Rout.save' ...875c875 < Error in fligner_test.IndependenceProblem(object = ) : --- > Error in fligner_test.IndependenceProblem(object = new("IndependenceProblem", : 878c878 < Error in conover_test.IndependenceProblem(object = ) : --- > Error in conover_test.IndependenceProblem(object = new("IndependenceProblem", : 881c881 < Error in sign_test.SymmetryProblem(object = ) : --- > Error in sign_test.SymmetryProblem(object = new("SymmetryProblem", x = structure(list( : 891c891 < Error in wilcoxsign_test.SymmetryProblem(object = ) : --- > Error in wilcoxsign_test.SymmetryProblem(object = new("SymmetryProblem", : 905c905 < Error in quade_test.SymmetryProblem(object = ) : --- > Error in quade_test.SymmetryProblem(object = new("SymmetryProblem", x = structure(list( : Running 'comparisons.R' [5s] Comparing 'comparisons.Rout' to 'comparisons.Rout.save' ... OK Running 'regtest_2sample.R' [6s] Comparing 'regtest_2sample.Rout' to 'regtest_2sample.Rout.save' ... OK Running 'regtest_Ksample.R' [5s] Comparing 'regtest_Ksample.Rout' to 'regtest_Ksample.Rout.save' ...62c62 < Error in fligner_test.IndependenceProblem(object = ) : --- > Error in fligner_test.IndependenceProblem(object = new("IndependenceProblem", : Running 'regtest_MTP.R' [6s] Comparing 'regtest_MTP.Rout' to 'regtest_MTP.Rout.save' ... OK Running 'regtest_contingency.R' [4s] Comparing 'regtest_contingency.Rout' to 'regtest_contingency.Rout.save' ... OK Running 'regtest_correlation.R' [3s] Comparing 'regtest_correlation.Rout' to 'regtest_correlation.Rout.save' ... OK Running 'regtest_distribution.R' [11s] Comparing 'regtest_distribution.Rout' to 'regtest_distribution.Rout.save' ... OK Running 'regtest_helpers.R' [3s] Comparing 'regtest_helpers.Rout' to 'regtest_helpers.Rout.save' ... OK Running 'regtest_midpvalue.R' [3s] Comparing 'regtest_midpvalue.Rout' to 'regtest_midpvalue.Rout.save' ... OK Running 'regtest_names.R' [7s] Comparing 'regtest_names.Rout' to 'regtest_names.Rout.save' ... OK Running 'regtest_size.R' [4s] Comparing 'regtest_size.Rout' to 'regtest_size.Rout.save' ... OK Running 'regtest_trafo.R' [2s] Comparing 'regtest_trafo.Rout' to 'regtest_trafo.Rout.save' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... [41s] OK * checking re-building of vignette outputs ... [90s] OK * checking PDF version of manual ... OK * DONE Status: OK