cliqueMS-package | 'cliqueMS' annotates isotopes and adducts in m/z data |
anClique | 'anClique-class' for annotating isotopes and adducts |
anClique-class | 'anClique-class' for annotating isotopes and adducts |
cliqueMS | 'cliqueMS' annotates isotopes and adducts in m/z data |
computeCliques | Computes clique groups from a similarity network |
createanClique | 'createanClique' generic function to create an object of class 'anClique'. |
createanClique.XCMSnExp | 'createanClique.XCMSnExp' produces an object of class 'anClique'. |
createanClique.xcmsSet | 'createanClique.xcmsSet' produces an object of class 'anClique'. |
createNetwork | Generic function to create a similarity network from processed m/z data |
createNetwork.XCMSnExp | Function to create a similarity network from 'XCMSnExp' processed m/z data |
createNetwork.xcmsSet | Function to create a similarity network from 'xcmsSet' processed m/z data |
ex.cliqueGroups | Example m/z processed data |
getAnnotation | Annotate adducts and fragments |
getCliques | Compute clique groups from processed m/z data |
getIsotopes | Annotate isotopes |
negative.adinfo | Default list of negative charged adducts |
positive.adinfo | Default list of positive charged adducts |