Three-Way / Multigroup Data Analysis Through Densities

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Documentation for package ‘dad’ version 3.2.0

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A B C D F G H I J K L M P R S T V W

dad-package Three-Way Data Analysis Through Densities

-- A --

append.df2folderh Adds a data frame to a 'folderh'.
appendtofolderh Adds a data frame to a 'folderh'.
as.data.frame.folder Folder to data frame
as.data.frame.folderh Hierarchic folder to data frame
as.data.frame.foldert foldert to data frame
as.folder Coerce to a folder
as.folder.data.frame Data frame to folder
as.folder.folderh Hierarchic folder to folder
as.folderh Coerce to a folderh
as.folderh.foldermtg Build a hierarchic folder from an object of class foldermtg
as.foldert Coerce to a foldert
as.foldert.array Data frame to foldert
as.foldert.data.frame Data frame to foldert

-- B --

bandwidth.parameter Parameter of the normal reference rule

-- C --

castles Alsacian castles by year of building
castles.dated Dated Alsacian castles
castles.nondated Non dated Alsacian castles
cor.folder Correlation matrices of a folder of data sets
corf Correlation matrices of a folder of data sets

-- D --

dad Three-Way Data Analysis Through Densities
df2folder Data frame to folder
dist.l2d.gp L^2 distance between Gaussian densities given their parameters
dist.l2d.gp.u L^2 distance between Gaussian densities given their parameters
dist.l2d.gs L^2 distance between probability densities
dist.l2d.gs.u L^2 distance between probability densities
dist.l2d.kga L^2 distance between probability densities
dist.l2d.kga.u L^2 distance between probability densities
dist.l2d.kgw L^2 distance between probability densities
dist.l2d.kgw.u L^2 distance between probability densities
distl2d L^2 distance between probability densities
distl2dpar L^2 distance between Gaussian densities given their parameters
dstatis Dual STATIS method (interstructure stage)
dstatis.inter Dual STATIS method (interstructure stage)

-- F --

fdiscd.misclass Misclassification ratio in functional discriminant analysis of probability densities.
fdiscd.predict Predicting the class of a group of individuals with discriminant analysis of probability densities.
fhclustd Hierarchic cluster analysis of probability densities
floribundity Rose flowering
fmdsd Multidimensional scaling of probability densities
folder Folder of data sets
folder2df Folder to data frame
folderh Hierarchic folder of n data frames related in pairs by (n-1) keys
folderh2df Hierarchic folder to data frame
folderh2folder Hierarchic folder to folder
foldermtg foldermtg
foldert Folder of data sets among time
fpcad Functional PCA of probability densities
fpcat Functional PCA of probability densities among time

-- G --

getcol.folder Select columns in all elements of a folder
getcol.foldert Select columns in all elements of a foldert
getrow.folder Select rows in all elements of a folder
getrow.foldert Select rows in all elements of a foldert

-- H --

hellinger Hellinger distance between Gaussian densities
hellingerpar Hellinger distance between Gaussian densities given their parameters

-- I --

interpret Scores of the 'fpcad', 'fpcat' or 'fmdsd' function vs. moments of the densities
interpret.dstatis Scores of the 'dstatis' function vs. moments of the densities
interpret.fmdsd Scores of the 'fmdsd' function vs. moments of the densities
interpret.fpcad Scores of the 'fpcad' function vs. moments of the densities
interpret.fpcat Scores of the 'fpcat' function vs. moments of the densities
is.dstatis Class 'dstatis'
is.fdiscd.misclass Class 'fdiscd.misclass'
is.fdiscd.predict Class 'fdiscd.predict'
is.fhclustd Class 'fhclustd'
is.fmdsd Class 'fmdsd'
is.folder Class 'folder'
is.folderh Class 'folderh'
is.foldermtg Class 'foldermtg'
is.foldert Class 'foldert'
is.fpcad Class 'fpcad'

-- J --

jeffreys Jeffreys measure between Gaussian densities
jeffreyspar Jeffreys measure between Gaussian densities given their parameters

-- K --

kurtosis.folder Kurtosis coefficients of a folder of data sets
kurtosisf Kurtosis coefficients of a folder of data sets

-- L --

l2d L^2 inner product of probability densities
l2d.gp L^2 inner product of Gaussian densities given their parameters
l2d.gp.u L^2 inner product of Gaussian densities given their parameters
l2d.gs L^2 inner product of probability densities
l2d.gs.u L^2 inner product of probability densities
l2d.kga L^2 inner product of probability densities
l2d.kga.u L^2 inner product of probability densities
l2d.kgw L^2 inner product of probability densities
l2d.kgw.u L^2 inner product of probability densities
l2dpar L^2 inner product of Gaussian densities given their parameters

-- M --

mat.dist.l2d.gp Matrix of L^2 distances between Gaussian densities given their parameters
mat.dist.l2d.gp.u Matrix of L^2 distances between Gaussian densities given their parameters
mat.dist.l2d.gs Matrix of L^2 distances between probability densities
mat.dist.l2d.gs.u Matrix of L^2 distances between probability densities
mat.dist.l2d.kga Matrix of L^2 distances between probability densities
mat.dist.l2d.kga.u Matrix of L^2 distances between probability densities
mat.dist.l2d.kgw Matrix of L^2 distances between probability densities
mat.dist.l2d.kgw.u Matrix of L^2 distances between probability densities
mat.ip.l2d.gp Matrix of L^2 inner products of Gaussian densities
mat.ip.l2d.gp.u Matrix of L^2 inner products of Gaussian densities
mat.ip.l2d.gs Matrix of L^2 inner products of probability densities
mat.ip.l2d.gs.u Matrix of L^2 inner products of probability densities
mat.ip.l2d.kga Matrix of L^2 inner products of probability densities
mat.ip.l2d.kga.u Matrix of L^2 inner products of probability densities
mat.ip.l2d.kgw Matrix of L^2 inner products of probability densities
mat.ip.l2d.kgw.u Matrix of L^2 inner products of probability densities
matdistl2d Matrix of L^2 distances between probability densities
matdistl2dpar Matrix of L^2 distances between Gaussian densities given their parameters
mathellinger Matrix of Hellinger distances between Gaussian densities
mathellingerpar Matrix of Hellinger distances between Gaussian densities given their parameters
matipl2d Matrix of L^2 inner products of probability densities
matipl2dpar Matrix of L^2 inner products of Gaussian densities
matjeffreys Matrix of Jeffreys measures (symmetrised Kullback-Leibler divergences) between Gaussian densities
matjeffreyspar Matrix of Jeffreys measures (symmetrised Kullback-Leibler divergences) between Gaussian densities
matwasserstein Matrix of 2-Wassterstein distance between Gaussian densities
matwassersteinpar Matrix of 2-Wasserstein distances between Gaussian densities
mean.folder Means of a folder of data sets
meanf Means of a folder of data sets
mtgcomponents Components of upper scale of a vertex
mtgorder Branching order of vertices
mtgplant1 Class 'foldermtg'
mtgplant2 Class 'foldermtg'
mtgrank Ranks of vertices in a decomposition

-- P --

plot.dstatis Plotting scores of STATIS method (interstructure) analysis
plot.fhclustd Plotting a hierarchical clustering
plot.fmdsd Plotting scores of multidimensional scaling of density functions
plot.foldert Plotting data of a foldert
plot.fpcad Plotting scores of principal component analysis of density functions
plot.fpcat Plotting scores of principal component analysis of density functions among time
plotframes Plotting of two sets of variables
print.dstatis Printing results of STATIS method (interstructure) analysis
print.fdiscd.misclass Printing results of discriminant analysis of probability density functions
print.fdiscd.predict Printing results of discriminant analysis of probability density functions
print.fhclustd Printing results of a hierarchical clustering of probability density functions
print.fmdsd Printing results of a multidimensional scaling analysis of probability densities
print.foldermtg Printing an object of class 'foldermtg'
print.foldert Printing an object of class 'foldert'
print.fpcad Printing results of a functional PCA of probability densities
print.fpcat Printing results of a functional PCA of probability densities among time

-- R --

read.mtg Read a MTG (Multiscale Tree Graph) file
rmcol.folder Remove columns in all elements of a folder
rmcol.foldert Remove cols in all elements of a foldert
rmrow.folder Remove rows in all elements of a folder
rmrow.foldert Remove rows in all elements of a foldert
roseflowers Rose flowers
roseleaves Rose leaves
rosephytomer Rose leaf and internode dynamics
roses Roses data

-- S --

skewness.folder Skewness coefficients of a folder of data sets
skewnessf Skewness coefficients of a folder of data sets
sqrtmatrix Square root of a symmetric, positive semi-definite matrix
summary.folder Summarize a folder
summary.folderh Summarize a folderh
summary.foldermtg Summary of an object of class 'foldermtg'
summary.foldert Summarize a foldert

-- T --

topology Read a MTG (Multiscale Tree Graph) file

-- V --

var.folder Variance matrices of a folder of data sets
varf Variance matrices of a folder of data sets
varietyleaves Rose variety leaves

-- W --

wasserstein 2-Wasserstein distance between Gaussian densities
wassersteinpar 2-Wasserstein distance between Gaussian densities given their parameters