Hierarchical Modelling of Faecal Egg Counts


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Documentation for package ‘eggCounts’ version 2.1-2

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eggCounts-package Hierarchical modelling of faecal egg counts
eggCounts Hierarchical modelling of faecal egg counts
epgs Faecal egg count samples (before and after treatment)
fecrtCI Compute standard FECRT according to WAAVP guidelines
fecr_probs Compute the probability of the reduction parameter relative to the given threshold
fecr_stan Modelling the reduction of faecal egg count data
fecr_stanExtra Modelling the reduction of faecal egg count data using custom models
fecr_stanSimple Modelling the reduction of faecal egg count data using a simple Bayesian model
fec_stan Modelling of faecal egg count data (one-sample case)
getPrior_delta Get prior parameters from Beta distribution
getPrior_mu Get prior parameters from Gamma distribution
plotCounts Plot faecal egg count data
simData1s Simulate faecal egg count data (1-sample situation)
simData2s Simulate faecal egg count data (2-sample situation)
stan2mcmc Convert a Stanfit object to MCMC object