skeleSim-package | Genetic simulation engine |
analyses.check | Check all simulation parameters |
analysis.funcs | Analysis functions for skeleSim parameter objects |
analysisFunc | Analysis functions for skeleSim parameter objects |
calcChordDist | Analysis functions for skeleSim parameter objects |
currentLabel | SkeleSim internal functions |
currentScenario | SkeleSim internal functions |
fastsimcoal.params | fastsimcoal Parameters Class |
fastsimcoal.params-class | fastsimcoal Parameters Class |
formatOverallStats | Analysis functions for skeleSim parameter objects |
fsc.histEvCheck | Check parameters for fastsimcoal |
fsc.histEvConverges | Check parameters for fastsimcoal |
fsc.loadScenario | Load skeleSim scenario parameters for fastsimcoal |
fsc.run | Run fastsimcoal |
fsc.scenarioCheck | Check parameters for fastsimcoal |
fsc.write | Write fastsimcoal files |
gen.scenario.check | Check all simulation parameters |
getGammaMutRates | Get a Vector of Randomly Chosen Mutation Rates |
globalAnalysis | Analysis functions for skeleSim parameter objects |
hapSmryFunc | Analysis functions for skeleSim parameter objects |
loadResultsMatrix | Analysis functions for skeleSim parameter objects |
locusAnalysisGenotypes | Analysis functions for skeleSim parameter objects |
locusAnalysisHaplotypes | Analysis functions for skeleSim parameter objects |
non.scenario.check | Check all simulation parameters |
overall.check | Check all simulation parameters |
pairwiseAnalysis | Analysis functions for skeleSim parameter objects |
rmetasim.params-class | rmetasim Parameters Class |
rms.convert | Extract genetic data from landscape object |
rms.init.landscape | Initialize a landscape object |
rms.init.landscape.func | Initialize a landscape object |
rms.run | Run rmetasim |
rms.scenarioCheck | Check parameters for rmetasim |
rms.write | Write metasim file |
runSim | Run simulation |
scenario.params | skeleSim Parameters Class |
scenario.params-class | skeleSim Parameters Class |
skeleSim | Genetic simulation engine |
skeleSim.checks | Check all simulation parameters |
skeleSim.classes | skeleSim Parameters Class |
skeleSim.internals | SkeleSim internal functions |
skeleSim.params | skeleSim Parameters Class |
skeleSim.params-class | skeleSim Parameters Class |
skeleSimGUI | GUI for skeleSim system |