Survival Analysis for Pathways


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Documentation for package ‘survClip’ version 0.2.3

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cliqueSurvivalTest Perform survival test on all the cliques of the graph.
compPCs For internal usage only. Compute principal components according to the chosen method.
computeDays Function to compute days.
computePCs For internal usage only. Compute principal components according to the chosen method.
exp Expression dataset.
getTopLoadGenes Extract the relevant genes associated with survival
graph Expression dataset.
pathwaySurvivalTest Survival analysis on the whole pathway
sparseCompPCs For internal usage only. Compute principal components according to the chosen method.
survAnnot Annotations.
survCliques Class '"survCliques"'
survCliques-class Class '"survCliques"'
survPath Class '"survPath"'
survPath-class Class '"survPath"'
topoCompPCs For internal usage only. Compute principal components according to the chosen method.