cohort_relabund |
Creates a relative abundance cohort plot |
constord |
Plots constrained ordination results |
envtoverlay |
Environmental variable fitting to unconstrained ordination diagrams |
prev |
Create prevalence vs abundance plot |
pstoveg_otu |
converts the otu_table slot of a phyloseq object to a vegan-compatible matrix |
pstoveg_sample |
Converts sample_data slot of a phyloseq object to vegan-compatible matrix |
pstoveg_sd |
converts the sam_data slot of a phyloseq object to a vegan-compatible matrix |
qualcontour |
Create read quality color contour plots |
sigtab |
Differential abundance data |
sigtab.2vs3 |
Differential abundance data |
WWTP_Impact |
Freshwater stream microbiome data |