Semantic Annotation and Discoverability System for R-Based Artifacts


[Up] [Top]

Documentation for package ‘trackr’ version 0.10.5

Help Pages

A C D E F G H I J K L M N O P R S T U misc

-- A --

annotationText Accessor method for the annotation text (slot "annotationtext") of the plot object.
annotationText-method Accessor method for the annotation text (slot "annotationtext") of the plot object.
as.list Convert objects to lists
as.list-method Convert objects to lists
as.list.FeatureSet Convert objects to lists
as.list.ScriptNodeInfo Convert objects to lists

-- C --

codeInfo Accessors for the code analysis information of FeatureSet objects
codeInfo-method Accessors for the code analysis information of FeatureSet objects
codeInfo<- Accessors for the code analysis information of FeatureSet objects
codeInfo<--method Accessors for the code analysis information of FeatureSet objects
coordSystem Accessor method for the coordinate system (slot "coordsys") of the plot object.
coordSystem-method Accessor method for the coordinate system (slot "coordsys") of the plot object.

-- D --

dataLabels Accessors for the axis labels PlotFeatureSet objects
dataLabels-method Accessors for the axis labels PlotFeatureSet objects
dataLabels<- Accessors for the axis labels PlotFeatureSet objects
dataLabels<--method Accessors for the axis labels PlotFeatureSet objects
dataNames Accessor method for the variable names of the plot object. Not an exported method.
dataTypes Accessor method for the variable types (slot "vartypes") of the plot object.
dataTypes-method Accessor method for the variable types (slot "vartypes") of the plot object.
defaultTDB default TrackrDB
describePackage Accessor method for ObjFeatureSet "analysispkg" slot.
describePackage-method Accessor method for ObjFeatureSet "analysispkg" slot.
DFFeatureSet FeatureSet contstructors
DFFeatureSet-class FeatureSet (and Sub)-Classes
DocCollectionRef Reference to a DocCollection
DocCollectionRef-class Reference to a DocCollection

-- E --

editTags Accessors for the tags of FeatureSet objects
editTags-method Accessors for the tags of FeatureSet objects

-- F --

FeatureSet-class FeatureSet (and Sub)-Classes
findRecords Primary high-level API functions for Trackr Databases
fullData Accessor method for the data (slot "data") that is used in plotting.
fullData-method Accessor method for the data (slot "data") that is used in plotting.

-- G --

generateTags customizing-metadata
generateTags-method customizing-metadata
geomObject Accessors for the geom of GGplotFeatureSet objects
geomObject-method Accessors for the geom of GGplotFeatureSet objects
geomObject<- Accessors for the geom of GGplotFeatureSet objects
geomObject<--method Accessors for the geom of GGplotFeatureSet objects
gg ggplot S4 classes
gg-class ggplot S4 classes
ggplot-class ggplot S4 classes
GGplotFeatureSet FeatureSet contstructors
GGplotFeatureSet-class FeatureSet (and Sub)-Classes
GraphicsFeatureSet FeatureSet contstructors
GraphicsFeatureSet-class FeatureSet (and Sub)-Classes
graphSys Accessor method for PlotFeatureSet "package" slot.
graphSys-method Accessor method for PlotFeatureSet "package" slot.
groupInfo Accessor method for the panel and other grouping information (slot "grouping") of the plot object.
groupInfo-method Accessor method for the panel and other grouping information (slot "grouping") of the plot object.
gTree ggplot S4 classes
gTree-class ggplot S4 classes

-- H --

hasLegend Accessor method for the legend indicator (slot "haslegend") of the plot object.
hasLegend-method Accessor method for the legend indicator (slot "haslegend") of the plot object.

-- I --

img_dir options extraction
img_dir-method options extraction
img_ext options extraction
img_ext-method options extraction
insert_record Backend-interface API
insert_record-method Backend-interface API

-- J --

JSONBackend JSON backend for trackr
jsonbackend JSON backend for trackr
JSONBackend-class JSON backend for trackr
jsonTDB Convenience constructors for specific trackr backends

-- K --

knit_and_record Knit and record an Rmd, Rnw, etc file

-- L --

ListBackend Reference to a DocCollection
listbackend Reference to a DocCollection
ListBackend-class Reference to a DocCollection
listTDB Convenience constructors for specific trackr backends

-- M --

makeFeatureSet Construct an ObjFeatureSet.
makeFeatureSet-method Construct an ObjFeatureSet.
make_image_files Make image files for a featureset
make_image_files-method Make image files for a featureset
manifestFromRecord Generate a (switchr) Seed Manifest from a Record

-- N --

names<--method Reference to a DocCollection
ndoc-method Reference to a DocCollection
ndoc-method Number of docs in a TrackrDB
nLayers Accessors for the number of layers of GGplotFeatureSet objects
nLayers-method Accessors for the number of layers of GGplotFeatureSet objects
nLayers<- Accessors for the number of layers of GGplotFeatureSet objects
nLayers<--method Accessors for the number of layers of GGplotFeatureSet objects
nObs Accessor method for the number of observations (slot "nobs") of the plot object.
nObs-method Accessor method for the number of observations (slot "nobs") of the plot object.

-- O --

objCode Accessors for the code of FeatureSet objects
objCode-method Accessors for the code of FeatureSet objects
objCode<- Accessors for the code of FeatureSet objects
objCode<--method Accessors for the code of FeatureSet objects
ObjFeatureSet FeatureSet contstructors
ObjFeatureSet-class FeatureSet (and Sub)-Classes

-- P --

parseCode Parse result creation code
parseCode-method Parse result creation code
plot-method Display the plot object owned by PlotFeatureSet objects and subclasses thereof.
PlotFeatureSet FeatureSet contstructors
PlotFeatureSet-class FeatureSet (and Sub)-Classes
position Accessors for the position of GGplotFeatureSet objects
position-method Accessors for the position of GGplotFeatureSet objects
position<- Accessors for the position of GGplotFeatureSet objects
position<--method Accessors for the position of GGplotFeatureSet objects
prep_for_backend Backend-interface API
prep_for_backend-method Backend-interface API
print.gTree Print method for an object of class gTree.

-- R --

record Primary high-level API functions for Trackr Databases
recordFiles Primary high-level API functions for Trackr Databases
regDateTime Accessors for the registration Date/Time of FeatureSet objects
regDateTime-method Accessors for the registration Date/Time of FeatureSet objects
regDateTime<- Accessors for the registration Date/Time of FeatureSet objects
regDateTime<--method Accessors for the registration Date/Time of FeatureSet objects
remove_record Backend-interface API
remove_record-method Backend-interface API
RmdFeatureSet FeatureSet contstructors
RmdFeatureSet-class FeatureSet (and Sub)-Classes
rmRecord Primary high-level API functions for Trackr Databases
RStudioExtras RStudioExtras class
RStudioExtras-class RStudioExtras class

-- S --

saveBasicPlot Save the plot object owned by an object of class/superclass PlotFeatureSet as an image.
saveBasicPlot-method Save the plot object owned by an object of class/superclass PlotFeatureSet as an image.
show-method FeatureSet (and Sub)-Classes
solrTDB Convenience constructors for specific trackr backends
statTransform Accessors for the stat(s) of GGplotFeatureSet objects
statTransform-method Accessors for the stat(s) of GGplotFeatureSet objects
statTransform<- Accessors for the stat(s) of GGplotFeatureSet objects
statTransform<--method Accessors for the stat(s) of GGplotFeatureSet objects
summary-method Summarize an object of class/superclass PlotFeatureSet

-- T --

tags Accessors for the tags of FeatureSet objects
tags-method Accessors for the tags of FeatureSet objects
tags<- Accessors for the tags of FeatureSet objects
tags<--method Accessors for the tags of FeatureSet objects
titles Accessors for the title(s) of FeatureSet objects
titles-method Accessors for the title(s) of FeatureSet objects
titles<- Accessors for the title(s) of FeatureSet objects
titles<--method Accessors for the title(s) of FeatureSet objects
trackrAddin RStudio addin/Shiny app for artifact discovery
TrackrDB Trackr database
TrackrDB-class Trackr database
TrackrOptions Trackr configuration options
TrackrOptions-class Trackr configuration options
trackropts trackr options environment
trackr_knit_env Internal details
trackr_lookup Backend-interface API
trackr_lookup-method Backend-interface API
trackr_options options extraction
trackr_options-method options extraction
trackr_search Backend-interface API
trackr_search-method Backend-interface API
trackr_write Backend-interface API
trackr_write-method Backend-interface API
trellis ggplot S4 classes
trellis-class ggplot S4 classes
TrellisFeatureSet FeatureSet contstructors
TrellisFeatureSet-class FeatureSet (and Sub)-Classes

-- U --

uniqueID Accessor methods for "uniqueid" of FeatureSet objects
uniqueID-method Accessor methods for "uniqueid" of FeatureSet objects
uniqueID<- Accessor methods for "uniqueid" of FeatureSet objects
uniqueID<--method Accessor methods for "uniqueid" of FeatureSet objects
user Accessors for the "user" of FeatureSet objects
user-method Accessors for the "user" of FeatureSet objects
user<- Accessors for the "user" of FeatureSet objects
user<--method Accessors for the "user" of FeatureSet objects

-- misc --

.DFFeatureSet FeatureSet (and Sub)-Classes
.docrefclass Reference to a DocCollection
.FeatureSet FeatureSet (and Sub)-Classes
.GGplotFeatureSet FeatureSet (and Sub)-Classes
.GraphicsFeatureSet FeatureSet (and Sub)-Classes
.ObjFeatureSet FeatureSet (and Sub)-Classes
.PlotFeatureSet FeatureSet (and Sub)-Classes
.RmdFeatureSet FeatureSet (and Sub)-Classes
.TrellisFeatureSet FeatureSet (and Sub)-Classes