Whole Genome Average Interval Mapping for QTL Detection using Mixed Models


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Documentation for package ‘wgaim’ version 1.4-11

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wgaim-package Whole Genome Average Interval Mapping (wgaim) for QTL detection
cross2int Convert a cross genetic object to an interval object
genoCxR Genotypic marker data for Cascades x RAC875-2 doubled haploid population in R/qtl format
genoRxK Genotypic marker data for RAC875 x Kukri doubled haploid population in R/qtl format
genoSxT Genotypic marker data for Sunco x Tasman doubled haploid population in R/qtl format
link.map Plot a genetic linkage map
link.map.cross Plot a genetic linkage map
link.map.default Plot a genetic linkage map with QTL for multiple traits
link.map.wgaim Plot a genetic linkage map with QTL's
out.stat Plot the blups or interval outlier statistics from specififed iteratons of wgaim
phenoCxR Phenotypic Cascades x RAC875-2 zinc experiment data frame
phenoRxK Phenotypic RAC875 x Kukri trial data frame
phenoSxT Phenotypic Sunco x Tasman trial data frame
print.summary.wgaim Summary and print methods for the class "wgaim"
print.wgaim Summary and print methods for the class "wgaim"
qtlTable Stack QTL summary information into a super table
summary.wgaim Summary and print methods for the class "wgaim"
tr Display diagnostic information about wgaim QTL model
tr.wgaim Display diagnostic information about wgaim QTL model
wgaim wgaim method for class "asreml"
wgaim.asreml wgaim method for class "asreml"