* using log directory 'd:/Rcompile/CRANpkg/local/3.6/Signac.Rcheck'
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'Signac/DESCRIPTION' ... OK
* this is package 'Signac' version '1.1.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'Signac' can be installed ... ERROR
Installation failed.
See 'd:/Rcompile/CRANpkg/local/3.6/Signac.Rcheck/00install.out' for details.
* DONE
The installation logfile:
* installing *source* package 'Signac' ...
** package 'Signac' successfully unpacked and MD5 sums checked
** using staged installation
** libs

*** arch - i386
make[1]: Entering directory `/cygdrive/d/temp/RtmpmYbVHZ/R.INSTALL10d245648817/Signac/src-i386'
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++  -std=gnu++11 -I"D:/RCompile/recent/R-3.6.3/include" -DNDEBUG  -I"d:/RCompile/CRANpkg/lib/3.6/Rcpp/include"   -I"d:/Compiler/gcc-4.9.3/local330/include"     -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++  -std=gnu++11 -I"D:/RCompile/recent/R-3.6.3/include" -DNDEBUG  -I"d:/RCompile/CRANpkg/lib/3.6/Rcpp/include"   -I"d:/Compiler/gcc-4.9.3/local330/include"     -O2 -Wall  -mtune=core2 -c filter.cpp -o filter.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++  -std=gnu++11 -I"D:/RCompile/recent/R-3.6.3/include" -DNDEBUG  -I"d:/RCompile/CRANpkg/lib/3.6/Rcpp/include"   -I"d:/Compiler/gcc-4.9.3/local330/include"     -O2 -Wall  -mtune=core2 -c group.cpp -o group.o
group.cpp: In function 'SEXPREC* groupCommand(std::string, Rcpp::Nullable<Rcpp::Vector<16> >, std::size_t, bool)':
group.cpp:40:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (size_t i=0; i<whitelist_cells.size(); i++) {
                       ^
group.cpp:91:31: warning: 'end' may be used uninitialized in this function [-Wmaybe-uninitialized]
     uint8_t nuc_free_inc = end-start < 147 ? 1: 0;
                               ^
group.cpp:91:31: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++  -std=gnu++11 -I"D:/RCompile/recent/R-3.6.3/include" -DNDEBUG  -I"d:/RCompile/CRANpkg/lib/3.6/Rcpp/include"   -I"d:/Compiler/gcc-4.9.3/local330/include"     -O2 -Wall  -mtune=core2 -c split.cpp -o split.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++  -std=gnu++11 -I"D:/RCompile/recent/R-3.6.3/include" -DNDEBUG  -I"d:/RCompile/CRANpkg/lib/3.6/Rcpp/include"   -I"d:/Compiler/gcc-4.9.3/local330/include"     -O2 -Wall  -mtune=core2 -c validate.cpp -o validate.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++ -shared -s -static-libgcc -o Signac.dll tmp.def RcppExports.o filter.o group.o split.o validate.o -lz -Ld:/Compiler/gcc-4.9.3/local330/lib/i386 -Ld:/Compiler/gcc-4.9.3/local330/lib -LD:/RCompile/recent/R-3.6.3/bin/i386 -lR
make[1]: Leaving directory `/cygdrive/d/temp/RtmpmYbVHZ/R.INSTALL10d245648817/Signac/src-i386'
make[1]: Entering directory `/cygdrive/d/temp/RtmpmYbVHZ/R.INSTALL10d245648817/Signac/src-i386'
make[1]: Leaving directory `/cygdrive/d/temp/RtmpmYbVHZ/R.INSTALL10d245648817/Signac/src-i386'
installing to d:/Rcompile/CRANpkg/lib/3.6/00LOCK-Signac/00new/Signac/libs/i386

*** arch - x64
make[1]: Entering directory `/cygdrive/d/temp/RtmpmYbVHZ/R.INSTALL10d245648817/Signac/src-x64'
d:/Compiler/gcc-4.9.3/mingw_64/bin/g++ -m64 -std=gnu++11 -I"D:/RCompile/recent/R-3.6.3/include" -DNDEBUG  -I"d:/RCompile/CRANpkg/lib/3.6/Rcpp/include"   -I"d:/Compiler/gcc-4.9.3/local330/include"     -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
d:/Compiler/gcc-4.9.3/mingw_64/bin/g++ -m64 -std=gnu++11 -I"D:/RCompile/recent/R-3.6.3/include" -DNDEBUG  -I"d:/RCompile/CRANpkg/lib/3.6/Rcpp/include"   -I"d:/Compiler/gcc-4.9.3/local330/include"     -O2 -Wall  -mtune=core2 -c filter.cpp -o filter.o
d:/Compiler/gcc-4.9.3/mingw_64/bin/g++ -m64 -std=gnu++11 -I"D:/RCompile/recent/R-3.6.3/include" -DNDEBUG  -I"d:/RCompile/CRANpkg/lib/3.6/Rcpp/include"   -I"d:/Compiler/gcc-4.9.3/local330/include"     -O2 -Wall  -mtune=core2 -c group.cpp -o group.o
group.cpp: In function 'SEXPREC* groupCommand(std::string, Rcpp::Nullable<Rcpp::Vector<16> >, std::size_t, bool)':
group.cpp:40:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (size_t i=0; i<whitelist_cells.size(); i++) {
                       ^
group.cpp:91:31: warning: 'end' may be used uninitialized in this function [-Wmaybe-uninitialized]
     uint8_t nuc_free_inc = end-start < 147 ? 1: 0;
                               ^
group.cpp:91:31: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
d:/Compiler/gcc-4.9.3/mingw_64/bin/g++ -m64 -std=gnu++11 -I"D:/RCompile/recent/R-3.6.3/include" -DNDEBUG  -I"d:/RCompile/CRANpkg/lib/3.6/Rcpp/include"   -I"d:/Compiler/gcc-4.9.3/local330/include"     -O2 -Wall  -mtune=core2 -c split.cpp -o split.o
d:/Compiler/gcc-4.9.3/mingw_64/bin/g++ -m64 -std=gnu++11 -I"D:/RCompile/recent/R-3.6.3/include" -DNDEBUG  -I"d:/RCompile/CRANpkg/lib/3.6/Rcpp/include"   -I"d:/Compiler/gcc-4.9.3/local330/include"     -O2 -Wall  -mtune=core2 -c validate.cpp -o validate.o
d:/Compiler/gcc-4.9.3/mingw_64/bin/g++ -m64 -shared -s -static-libgcc -o Signac.dll tmp.def RcppExports.o filter.o group.o split.o validate.o -lz -Ld:/Compiler/gcc-4.9.3/local330/lib/x64 -Ld:/Compiler/gcc-4.9.3/local330/lib -LD:/RCompile/recent/R-3.6.3/bin/x64 -lR
make[1]: Leaving directory `/cygdrive/d/temp/RtmpmYbVHZ/R.INSTALL10d245648817/Signac/src-x64'
make[1]: Entering directory `/cygdrive/d/temp/RtmpmYbVHZ/R.INSTALL10d245648817/Signac/src-x64'
make[1]: Leaving directory `/cygdrive/d/temp/RtmpmYbVHZ/R.INSTALL10d245648817/Signac/src-x64'
installing to d:/Rcompile/CRANpkg/lib/3.6/00LOCK-Signac/00new/Signac/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: object 'markvario' is not exported by 'namespace:spatstat'
Execution halted
ERROR: lazy loading failed for package 'Signac'
* removing 'd:/Rcompile/CRANpkg/lib/3.6/Signac'
* restoring previous 'd:/Rcompile/CRANpkg/lib/3.6/Signac'