* using log directory 'd:/Rcompile/CRANpkg/local/3.6/SurvHiDim.Rcheck' * using R version 3.6.3 (2020-02-29) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'SurvHiDim/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'SurvHiDim' version '0.1.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'SurvHiDim' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [15s] NOTE hdClust: no visible global function definition for 'plot' hdNetwork: no visible global function definition for 'plot' hidimLasso: no visible global function definition for 'plot' hidimSurvbonlas: no visible global function definition for 'plot' hidimSurvlas: no visible global function definition for 'plot' Undefined global functions or variables: plot Consider adding importFrom("graphics", "plot") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ERROR Running examples in 'SurvHiDim-Ex.R' failed The error most likely occurred in: > ### Name: hdClust > ### Title: hdClust > ### Aliases: hdClust > > ### ** Examples > > ## > data(hnscc) > hdClust(7,105,0.05,2,ID="id",OS="os",Death="death",PFS="pfs",Prog="prog",hnscc) Error in `[.data.frame`(x, r, vars, drop = drop) : undefined columns selected Calls: hdClust -> subset -> subset.data.frame -> [ -> [.data.frame Execution halted * checking PDF version of manual ... OK * DONE Status: 1 ERROR, 1 NOTE