* using log directory 'd:/Rcompile/CRANpkg/local/3.6/VIM.Rcheck' * using R version 3.6.3 (2020-02-29) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'VIM/DESCRIPTION' ... OK * this is package 'VIM' version '6.1.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'VIM' can be installed ... OK * checking installed package size ... NOTE installed size is 5.1Mb sub-directories of 1Mb or more: doc 2.2Mb libs 1.5Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [32s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... [34s] OK ** running examples for arch 'x64' ... [37s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... [27s] ERROR Running 'testthat.R' [27s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(VIM) Loading required package: colorspace Loading required package: grid VIM is ready to use. Suggestions and bug-reports can be submitted at: https://github.com/statistikat/VIM/issues Attaching package: 'VIM' The following object is masked from 'package:datasets': sleep > test_check("VIM") Start: AIC=1391.05 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - m 1 1371.1 1389.1 - v2 1 1371.2 1389.2 - b 1 1371.5 1389.5 - c 4 1377.8 1389.8 1371.0 1391.0 - co 1 1374.5 1392.5 - v1 1 1375.7 1393.7 Step: AIC=1389.12 y ~ v1 + v2 + b + c + co Df Deviance AIC - v2 1 1371.3 1387.3 - b 1 1371.6 1387.6 - c 4 1377.9 1387.9 1371.1 1389.1 - co 1 1374.6 1390.6 - v1 1 1375.8 1391.8 Step: AIC=1387.33 y ~ v1 + b + c + co Df Deviance AIC - b 1 1371.8 1385.8 - c 4 1378.2 1386.2 1371.3 1387.3 - co 1 1374.9 1388.9 - v1 1 1375.9 1389.9 Step: AIC=1385.79 y ~ v1 + c + co Df Deviance AIC - c 4 1378.7 1384.7 1371.8 1385.8 - co 1 1375.4 1387.4 - v1 1 1376.3 1388.3 Step: AIC=1384.67 y ~ v1 + co Df Deviance AIC 1378.7 1384.7 - co 1 1382.0 1386.0 - v1 1 1382.8 1386.8 Start: AIC=1297.32 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1278.4 1290.4 - v2 1 1277.3 1295.3 - b 1 1277.5 1295.5 - m 1 1277.9 1295.9 1277.3 1297.3 - v1 1 1326.6 1344.6 - co 1 1335.5 1353.5 Step: AIC=1290.4 y ~ v1 + v2 + m + b + co Df Deviance AIC - v2 1 1278.4 1288.4 - b 1 1278.6 1288.6 - m 1 1279.0 1289.0 1278.4 1290.4 - v1 1 1327.2 1337.2 - co 1 1336.2 1346.2 Step: AIC=1288.43 y ~ v1 + m + b + co Df Deviance AIC - b 1 1278.7 1286.7 - m 1 1279.1 1287.1 1278.4 1288.4 - v1 1 1327.2 1335.2 - co 1 1336.3 1344.3 Step: AIC=1286.67 y ~ v1 + m + co Df Deviance AIC - m 1 1279.3 1285.3 1278.7 1286.7 - v1 1 1327.3 1333.3 - co 1 1336.7 1342.7 Step: AIC=1285.33 y ~ v1 + co Df Deviance AIC 1279.3 1285.3 - v1 1 1327.8 1331.8 - co 1 1337.8 1341.8 Start: AIC=1294.27 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1276.9 1288.9 - b 1 1274.3 1292.3 - v2 1 1274.4 1292.4 - m 1 1274.9 1292.9 1274.3 1294.3 - v1 1 1317.7 1335.7 - co 1 1339.2 1357.2 Step: AIC=1288.9 y ~ v1 + v2 + m + b + co Df Deviance AIC - b 1 1276.9 1286.9 - v2 1 1277.0 1287.0 - m 1 1277.7 1287.7 1276.9 1288.9 - v1 1 1319.8 1329.8 - co 1 1341.0 1351.0 Step: AIC=1286.93 y ~ v1 + v2 + m + co Df Deviance AIC - v2 1 1277.1 1285.1 - m 1 1277.8 1285.8 1276.9 1286.9 - v1 1 1319.8 1327.8 - co 1 1341.2 1349.2 Step: AIC=1285.07 y ~ v1 + m + co Df Deviance AIC - m 1 1278.0 1284.0 1277.1 1285.1 - v1 1 1319.8 1325.8 - co 1 1341.5 1347.5 Step: AIC=1283.95 y ~ v1 + co Df Deviance AIC 1278.0 1284.0 - v1 1 1320.5 1324.5 - co 1 1342.8 1346.8 Start: AIC=1293.21 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1275.9 1287.9 - b 1 1273.2 1291.2 - v2 1 1273.5 1291.5 - m 1 1273.7 1291.7 1273.2 1293.2 - v1 1 1311.4 1329.4 - co 1 1343.1 1361.1 Step: AIC=1287.86 y ~ v1 + v2 + m + b + co Df Deviance AIC - b 1 1275.9 1285.9 - v2 1 1276.2 1286.2 - m 1 1276.6 1286.6 1275.9 1287.9 - v1 1 1313.5 1323.5 - co 1 1345.0 1355.0 Step: AIC=1285.89 y ~ v1 + v2 + m + co Df Deviance AIC - v2 1 1276.2 1284.2 - m 1 1276.6 1284.6 1275.9 1285.9 - v1 1 1313.5 1321.5 - co 1 1345.1 1353.1 Step: AIC=1284.2 y ~ v1 + m + co Df Deviance AIC - m 1 1277.0 1283.0 1276.2 1284.2 - v1 1 1313.6 1319.6 - co 1 1345.7 1351.7 Step: AIC=1282.97 y ~ v1 + co Df Deviance AIC 1277.0 1283.0 - v1 1 1314.3 1318.3 - co 1 1346.9 1350.9 Start: AIC=1293.16 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1275.6 1287.6 - b 1 1273.2 1291.2 - m 1 1273.5 1291.5 - v2 1 1273.5 1291.5 1273.2 1293.2 - v1 1 1309.3 1327.3 - co 1 1344.5 1362.5 Step: AIC=1287.58 y ~ v1 + v2 + m + b + co Df Deviance AIC - b 1 1275.7 1285.7 - v2 1 1275.9 1285.9 - m 1 1276.1 1286.1 1275.6 1287.6 - v1 1 1311.1 1321.1 - co 1 1346.2 1356.2 Step: AIC=1285.66 y ~ v1 + v2 + m + co Df Deviance AIC - v2 1 1276.0 1284.0 - m 1 1276.1 1284.1 1275.7 1285.7 - v1 1 1311.2 1319.2 - co 1 1346.5 1354.5 Step: AIC=1284.01 y ~ v1 + m + co Df Deviance AIC - m 1 1276.5 1282.5 1276.0 1284.0 - v1 1 1311.3 1317.3 - co 1 1347.1 1353.1 Step: AIC=1282.54 y ~ v1 + co Df Deviance AIC 1276.5 1282.5 - v1 1 1311.8 1315.8 - co 1 1348.0 1352.0 Start: AIC=1391.05 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - m 1 1371.1 1389.1 - v2 1 1371.2 1389.2 - b 1 1371.5 1389.5 - c 4 1377.8 1389.8 1371.0 1391.0 - co 1 1374.5 1392.5 - v1 1 1375.7 1393.7 Step: AIC=1389.12 y ~ v1 + v2 + b + c + co Df Deviance AIC - v2 1 1371.3 1387.3 - b 1 1371.6 1387.6 - c 4 1377.9 1387.9 1371.1 1389.1 - co 1 1374.6 1390.6 - v1 1 1375.8 1391.8 Step: AIC=1387.33 y ~ v1 + b + c + co Df Deviance AIC - b 1 1371.8 1385.8 - c 4 1378.2 1386.2 1371.3 1387.3 - co 1 1374.9 1388.9 - v1 1 1375.9 1389.9 Step: AIC=1385.79 y ~ v1 + c + co Df Deviance AIC - c 4 1378.7 1384.7 1371.8 1385.8 - co 1 1375.4 1387.4 - v1 1 1376.3 1388.3 Step: AIC=1384.67 y ~ v1 + co Df Deviance AIC 1378.7 1384.7 - co 1 1382.0 1386.0 - v1 1 1382.8 1386.8 Start: AIC=1297.32 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1278.4 1290.4 - v2 1 1277.3 1295.3 - b 1 1277.5 1295.5 - m 1 1277.9 1295.9 1277.3 1297.3 - v1 1 1326.6 1344.6 - co 1 1335.5 1353.5 Step: AIC=1290.4 y ~ v1 + v2 + m + b + co Df Deviance AIC - v2 1 1278.4 1288.4 - b 1 1278.6 1288.6 - m 1 1279.0 1289.0 1278.4 1290.4 - v1 1 1327.2 1337.2 - co 1 1336.2 1346.2 Step: AIC=1288.43 y ~ v1 + m + b + co Df Deviance AIC - b 1 1278.7 1286.7 - m 1 1279.1 1287.1 1278.4 1288.4 - v1 1 1327.2 1335.2 - co 1 1336.3 1344.3 Step: AIC=1286.67 y ~ v1 + m + co Df Deviance AIC - m 1 1279.3 1285.3 1278.7 1286.7 - v1 1 1327.3 1333.3 - co 1 1336.7 1342.7 Step: AIC=1285.33 y ~ v1 + co Df Deviance AIC 1279.3 1285.3 - v1 1 1327.8 1331.8 - co 1 1337.8 1341.8 Start: AIC=1294.27 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1276.9 1288.9 - b 1 1274.3 1292.3 - v2 1 1274.4 1292.4 - m 1 1274.9 1292.9 1274.3 1294.3 - v1 1 1317.7 1335.7 - co 1 1339.2 1357.2 Step: AIC=1288.9 y ~ v1 + v2 + m + b + co Df Deviance AIC - b 1 1276.9 1286.9 - v2 1 1277.0 1287.0 - m 1 1277.7 1287.7 1276.9 1288.9 - v1 1 1319.8 1329.8 - co 1 1341.0 1351.0 Step: AIC=1286.93 y ~ v1 + v2 + m + co Df Deviance AIC - v2 1 1277.1 1285.1 - m 1 1277.8 1285.8 1276.9 1286.9 - v1 1 1319.8 1327.8 - co 1 1341.2 1349.2 Step: AIC=1285.07 y ~ v1 + m + co Df Deviance AIC - m 1 1278.0 1284.0 1277.1 1285.1 - v1 1 1319.8 1325.8 - co 1 1341.5 1347.5 Step: AIC=1283.95 y ~ v1 + co Df Deviance AIC 1278.0 1284.0 - v1 1 1320.5 1324.5 - co 1 1342.8 1346.8 Start: AIC=1293.21 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1275.9 1287.9 - b 1 1273.2 1291.2 - v2 1 1273.5 1291.5 - m 1 1273.7 1291.7 1273.2 1293.2 - v1 1 1311.4 1329.4 - co 1 1343.1 1361.1 Step: AIC=1287.86 y ~ v1 + v2 + m + b + co Df Deviance AIC - b 1 1275.9 1285.9 - v2 1 1276.2 1286.2 - m 1 1276.6 1286.6 1275.9 1287.9 - v1 1 1313.5 1323.5 - co 1 1345.0 1355.0 Step: AIC=1285.89 y ~ v1 + v2 + m + co Df Deviance AIC - v2 1 1276.2 1284.2 - m 1 1276.6 1284.6 1275.9 1285.9 - v1 1 1313.5 1321.5 - co 1 1345.1 1353.1 Step: AIC=1284.2 y ~ v1 + m + co Df Deviance AIC - m 1 1277.0 1283.0 1276.2 1284.2 - v1 1 1313.6 1319.6 - co 1 1345.7 1351.7 Step: AIC=1282.97 y ~ v1 + co Df Deviance AIC 1277.0 1283.0 - v1 1 1314.3 1318.3 - co 1 1346.9 1350.9 Start: AIC=1293.16 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1275.6 1287.6 - b 1 1273.2 1291.2 - m 1 1273.5 1291.5 - v2 1 1273.5 1291.5 1273.2 1293.2 - v1 1 1309.3 1327.3 - co 1 1344.5 1362.5 Step: AIC=1287.58 y ~ v1 + v2 + m + b + co Df Deviance AIC - b 1 1275.7 1285.7 - v2 1 1275.9 1285.9 - m 1 1276.1 1286.1 1275.6 1287.6 - v1 1 1311.1 1321.1 - co 1 1346.2 1356.2 Step: AIC=1285.66 y ~ v1 + v2 + m + co Df Deviance AIC - v2 1 1276.0 1284.0 - m 1 1276.1 1284.1 1275.7 1285.7 - v1 1 1311.2 1319.2 - co 1 1346.5 1354.5 Step: AIC=1284.01 y ~ v1 + m + co Df Deviance AIC - m 1 1276.5 1282.5 1276.0 1284.0 - v1 1 1311.3 1317.3 - co 1 1347.1 1353.1 Step: AIC=1282.54 y ~ v1 + co Df Deviance AIC 1276.5 1282.5 - v1 1 1311.8 1315.8 - co 1 1348.0 1352.0 Missings in variables: Variable Count NonD 14 Dream 12 Sleep 4 Span 4 Gest 4 Imputed missings in variables: Variable Count NonD 14 Dream 12 Sleep 4 Span 4 Gest 4 Time difference of 0.03119993 secs Time difference of 0.01559997 secs Time difference of 0.03119993 secs Time difference of 0.03119993 secs No missings in x. == Failed tests ================================================================ -- Failure (test_IRMI_ordered.R:10:3): irmi base ------------------------------- `ir <- irmi(test_df, mixed = "m", count = "co")` did not produce any warnings. -- Failure (test_IRMI_ordered.R:15:3): irmi step ------------------------------- `ir <- irmi(test_df, mixed = "m", count = "co", step = TRUE)` did not produce any warnings. -- Failure (test_IRMI_ordered.R:20:3): irmi step noise ------------------------- `ir <- irmi(test_df, mixed = "m", count = "co", step = TRUE, noise = TRUE)` did not produce any warnings. -- Failure (test_IRMI_ordered.R:25:3): irmi robust ----------------------------- `ir <- irmi(test_df, robust = TRUE, mixed = "m", count = "co")` did not produce any warnings. -- Failure (test_IRMI_ordered.R:34:3): irmi robust noise ----------------------- `... <- NULL` did not produce any warnings. -- Failure (test_IRMI_ordered.R:39:3): irmi robust noise with no imp_var ------- `... <- NULL` did not produce any warnings. [ FAIL 6 | WARN 0 | SKIP 0 | PASS 144 ] Error: Test failures Execution halted ** running tests for arch 'x64' ... [30s] ERROR Running 'testthat.R' [29s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(VIM) Loading required package: colorspace Loading required package: grid VIM is ready to use. Suggestions and bug-reports can be submitted at: https://github.com/statistikat/VIM/issues Attaching package: 'VIM' The following object is masked from 'package:datasets': sleep > test_check("VIM") Start: AIC=1384.78 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1370.2 1382.2 - v1 1 1364.8 1382.8 - v2 1 1364.9 1382.9 - co 1 1365.4 1383.4 1364.8 1384.8 - b 1 1370.6 1388.6 - m 1 1372.1 1390.1 Step: AIC=1382.18 y ~ v1 + v2 + m + b + co Df Deviance AIC - v2 1 1370.2 1380.2 - v1 1 1370.2 1380.2 - co 1 1370.8 1380.8 1370.2 1382.2 - b 1 1375.7 1385.7 - m 1 1377.5 1387.5 Step: AIC=1380.21 y ~ v1 + m + b + co Df Deviance AIC - v1 1 1370.3 1378.3 - co 1 1370.8 1378.8 1370.2 1380.2 - b 1 1375.7 1383.7 - m 1 1377.5 1385.5 Step: AIC=1378.26 y ~ m + b + co Df Deviance AIC - co 1 1370.8 1376.8 1370.3 1378.3 - b 1 1375.8 1381.8 - m 1 1377.5 1383.5 Step: AIC=1376.84 y ~ m + b Df Deviance AIC 1370.8 1376.8 - b 1 1376.2 1380.2 - m 1 1378.0 1382.0 Start: AIC=1288.31 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1269.2 1281.2 - v2 1 1268.6 1286.6 - v1 1 1268.8 1286.8 - co 1 1268.8 1286.8 1268.3 1288.3 - b 1 1317.5 1335.5 - m 1 1320.4 1338.4 Step: AIC=1281.24 y ~ v1 + v2 + m + b + co Df Deviance AIC - v2 1 1269.6 1279.6 - v1 1 1269.8 1279.8 - co 1 1269.8 1279.8 1269.2 1281.2 - b 1 1318.1 1328.1 - m 1 1321.3 1331.3 Step: AIC=1279.57 y ~ v1 + m + b + co Df Deviance AIC - co 1 1270.1 1278.1 - v1 1 1270.1 1278.1 1269.6 1279.6 - b 1 1318.3 1326.3 - m 1 1321.7 1329.7 Step: AIC=1278.08 y ~ v1 + m + b Df Deviance AIC - v1 1 1270.7 1276.7 1270.1 1278.1 - b 1 1318.6 1324.6 - m 1 1322.0 1328.0 Step: AIC=1276.65 y ~ m + b Df Deviance AIC 1270.7 1276.7 - b 1 1319.0 1323.0 - m 1 1322.1 1326.1 Start: AIC=1285.55 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1267.4 1279.4 - co 1 1265.7 1283.7 - v2 1 1266.2 1284.2 - v1 1 1266.3 1284.3 1265.5 1285.5 - m 1 1311.8 1329.8 - b 1 1325.3 1343.3 Step: AIC=1279.41 y ~ v1 + v2 + m + b + co Df Deviance AIC - co 1 1267.6 1277.6 - v2 1 1268.1 1278.1 - v1 1 1268.2 1278.2 1267.4 1279.4 - m 1 1313.2 1323.2 - b 1 1326.6 1336.6 Step: AIC=1277.59 y ~ v1 + v2 + m + b Df Deviance AIC - v2 1 1268.3 1276.3 - v1 1 1268.4 1276.4 1267.6 1277.6 - m 1 1313.2 1321.2 - b 1 1326.7 1334.7 Step: AIC=1276.31 y ~ v1 + m + b Df Deviance AIC - v1 1 1269.2 1275.2 1268.3 1276.3 - m 1 1314.1 1320.1 - b 1 1327.1 1333.1 Step: AIC=1275.18 y ~ m + b Df Deviance AIC 1269.2 1275.2 - m 1 1314.4 1318.4 - b 1 1327.8 1331.8 Start: AIC=1283.32 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1265.1 1277.1 - co 1 1263.6 1281.6 - v2 1 1264.0 1282.0 - v1 1 1264.1 1282.1 1263.3 1283.3 - m 1 1301.3 1319.3 - b 1 1335.3 1353.3 Step: AIC=1277.1 y ~ v1 + v2 + m + b + co Df Deviance AIC - co 1 1265.4 1275.4 - v2 1 1265.8 1275.8 - v1 1 1266.0 1276.0 1265.1 1277.1 - m 1 1302.6 1312.6 - b 1 1336.7 1346.7 Step: AIC=1275.41 y ~ v1 + v2 + m + b Df Deviance AIC - v2 1 1266.1 1274.1 - v1 1 1266.3 1274.3 1265.4 1275.4 - m 1 1302.7 1310.7 - b 1 1336.8 1344.8 Step: AIC=1274.14 y ~ v1 + m + b Df Deviance AIC - v1 1 1267.1 1273.1 1266.1 1274.1 - m 1 1303.6 1309.6 - b 1 1337.2 1343.2 Step: AIC=1273.1 y ~ m + b Df Deviance AIC 1267.1 1273.1 - m 1 1304.0 1308.0 - b 1 1337.9 1341.9 Start: AIC=1279.22 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1260.1 1272.1 - co 1 1259.6 1277.6 - v2 1 1259.9 1277.9 - v1 1 1260.6 1278.6 1259.2 1279.2 - m 1 1283.7 1301.7 - b 1 1350.4 1368.4 Step: AIC=1272.09 y ~ v1 + v2 + m + b + co Df Deviance AIC - co 1 1260.4 1270.4 - v2 1 1260.8 1270.8 - v1 1 1261.5 1271.5 1260.1 1272.1 - m 1 1284.6 1294.6 - b 1 1351.0 1361.0 Step: AIC=1270.44 y ~ v1 + v2 + m + b Df Deviance AIC - v2 1 1261.2 1269.2 - v1 1 1261.9 1269.9 1260.4 1270.4 - m 1 1284.8 1292.8 - b 1 1351.2 1359.2 Step: AIC=1269.16 y ~ v1 + m + b Df Deviance AIC - v1 1 1262.8 1268.8 1261.2 1269.2 - m 1 1285.7 1291.7 - b 1 1351.5 1357.5 Step: AIC=1268.75 y ~ m + b Df Deviance AIC 1262.8 1268.8 - m 1 1286.7 1290.7 - b 1 1352.8 1356.8 Start: AIC=1268.64 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1249.5 1261.5 - v2 1 1248.8 1266.8 - co 1 1249.1 1267.1 1248.6 1268.6 - v1 1 1251.1 1269.1 - m 1 1259.2 1277.2 - b 1 1369.2 1387.2 Step: AIC=1261.48 y ~ v1 + v2 + m + b + co Df Deviance AIC - v2 1 1249.7 1259.7 - co 1 1249.9 1259.9 1249.5 1261.5 - v1 1 1251.9 1261.9 - m 1 1260.1 1270.1 - b 1 1369.7 1379.7 Step: AIC=1259.68 y ~ v1 + m + b + co Df Deviance AIC - co 1 1250.1 1258.1 1249.7 1259.7 - v1 1 1252.2 1260.2 - m 1 1260.3 1268.3 - b 1 1369.7 1377.7 Step: AIC=1258.1 y ~ v1 + m + b Df Deviance AIC 1250.1 1258.1 - v1 1 1252.7 1258.7 - m 1 1260.6 1266.6 - b 1 1369.9 1375.9 Start: AIC=1260.47 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1240.8 1252.8 - co 1 1241.0 1259.0 - v2 1 1241.0 1259.0 1240.5 1260.5 - v1 1 1243.0 1261.0 - m 1 1244.5 1262.5 - b 1 1377.9 1395.9 Step: AIC=1252.82 y ~ v1 + v2 + m + b + co Df Deviance AIC - co 1 1241.3 1251.3 - v2 1 1241.4 1251.4 1240.8 1252.8 - v1 1 1243.3 1253.3 - m 1 1244.8 1254.8 - b 1 1378.3 1388.3 Step: AIC=1251.3 y ~ v1 + v2 + m + b Df Deviance AIC - v2 1 1241.9 1249.9 1241.3 1251.3 - v1 1 1243.8 1251.8 - m 1 1245.2 1253.2 - b 1 1378.4 1386.4 Step: AIC=1249.86 y ~ v1 + m + b Df Deviance AIC 1241.9 1249.9 - v1 1 1244.5 1250.5 - m 1 1245.8 1251.8 - b 1 1378.6 1384.6 Start: AIC=1259.73 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1240.0 1252.0 - v2 1 1240.2 1258.2 - co 1 1240.4 1258.4 - v1 1 1241.4 1259.4 1239.7 1259.7 - m 1 1242.5 1260.5 - b 1 1380.0 1398.0 Step: AIC=1252 y ~ v1 + v2 + m + b + co Df Deviance AIC - v2 1 1240.5 1250.5 - co 1 1240.6 1250.6 - v1 1 1241.8 1251.8 1240.0 1252.0 - m 1 1242.8 1252.8 - b 1 1380.3 1390.3 Step: AIC=1250.49 y ~ v1 + m + b + co Df Deviance AIC - co 1 1241.1 1249.1 - v1 1 1242.3 1250.3 1240.5 1250.5 - m 1 1243.3 1251.3 - b 1 1380.5 1388.5 Step: AIC=1249.12 y ~ v1 + m + b Df Deviance AIC - v1 1 1243.0 1249.0 1241.1 1249.1 - m 1 1243.8 1249.8 - b 1 1380.7 1386.7 Step: AIC=1248.99 y ~ m + b Df Deviance AIC 1243.0 1249.0 - m 1 1245.5 1249.5 - b 1 1382.0 1386.0 Start: AIC=1384.78 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1370.2 1382.2 - v1 1 1364.8 1382.8 - v2 1 1364.9 1382.9 - co 1 1365.4 1383.4 1364.8 1384.8 - b 1 1370.6 1388.6 - m 1 1372.1 1390.1 Step: AIC=1382.18 y ~ v1 + v2 + m + b + co Df Deviance AIC - v2 1 1370.2 1380.2 - v1 1 1370.2 1380.2 - co 1 1370.8 1380.8 1370.2 1382.2 - b 1 1375.7 1385.7 - m 1 1377.5 1387.5 Step: AIC=1380.21 y ~ v1 + m + b + co Df Deviance AIC - v1 1 1370.3 1378.3 - co 1 1370.8 1378.8 1370.2 1380.2 - b 1 1375.7 1383.7 - m 1 1377.5 1385.5 Step: AIC=1378.26 y ~ m + b + co Df Deviance AIC - co 1 1370.8 1376.8 1370.3 1378.3 - b 1 1375.8 1381.8 - m 1 1377.5 1383.5 Step: AIC=1376.84 y ~ m + b Df Deviance AIC 1370.8 1376.8 - b 1 1376.2 1380.2 - m 1 1378.0 1382.0 Start: AIC=1288.31 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1269.2 1281.2 - v2 1 1268.6 1286.6 - v1 1 1268.8 1286.8 - co 1 1268.8 1286.8 1268.3 1288.3 - b 1 1317.5 1335.5 - m 1 1320.4 1338.4 Step: AIC=1281.24 y ~ v1 + v2 + m + b + co Df Deviance AIC - v2 1 1269.6 1279.6 - v1 1 1269.8 1279.8 - co 1 1269.8 1279.8 1269.2 1281.2 - b 1 1318.1 1328.1 - m 1 1321.3 1331.3 Step: AIC=1279.57 y ~ v1 + m + b + co Df Deviance AIC - co 1 1270.1 1278.1 - v1 1 1270.1 1278.1 1269.6 1279.6 - b 1 1318.3 1326.3 - m 1 1321.7 1329.7 Step: AIC=1278.08 y ~ v1 + m + b Df Deviance AIC - v1 1 1270.7 1276.7 1270.1 1278.1 - b 1 1318.6 1324.6 - m 1 1322.0 1328.0 Step: AIC=1276.65 y ~ m + b Df Deviance AIC 1270.7 1276.7 - b 1 1319.0 1323.0 - m 1 1322.1 1326.1 Start: AIC=1285.55 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1267.4 1279.4 - co 1 1265.7 1283.7 - v2 1 1266.2 1284.2 - v1 1 1266.3 1284.3 1265.5 1285.5 - m 1 1311.8 1329.8 - b 1 1325.3 1343.3 Step: AIC=1279.41 y ~ v1 + v2 + m + b + co Df Deviance AIC - co 1 1267.6 1277.6 - v2 1 1268.1 1278.1 - v1 1 1268.2 1278.2 1267.4 1279.4 - m 1 1313.2 1323.2 - b 1 1326.6 1336.6 Step: AIC=1277.59 y ~ v1 + v2 + m + b Df Deviance AIC - v2 1 1268.3 1276.3 - v1 1 1268.4 1276.4 1267.6 1277.6 - m 1 1313.2 1321.2 - b 1 1326.7 1334.7 Step: AIC=1276.31 y ~ v1 + m + b Df Deviance AIC - v1 1 1269.2 1275.2 1268.3 1276.3 - m 1 1314.1 1320.1 - b 1 1327.1 1333.1 Step: AIC=1275.18 y ~ m + b Df Deviance AIC 1269.2 1275.2 - m 1 1314.4 1318.4 - b 1 1327.8 1331.8 Start: AIC=1283.32 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1265.1 1277.1 - co 1 1263.6 1281.6 - v2 1 1264.0 1282.0 - v1 1 1264.1 1282.1 1263.3 1283.3 - m 1 1301.3 1319.3 - b 1 1335.3 1353.3 Step: AIC=1277.1 y ~ v1 + v2 + m + b + co Df Deviance AIC - co 1 1265.4 1275.4 - v2 1 1265.8 1275.8 - v1 1 1266.0 1276.0 1265.1 1277.1 - m 1 1302.6 1312.6 - b 1 1336.7 1346.7 Step: AIC=1275.41 y ~ v1 + v2 + m + b Df Deviance AIC - v2 1 1266.1 1274.1 - v1 1 1266.3 1274.3 1265.4 1275.4 - m 1 1302.7 1310.7 - b 1 1336.8 1344.8 Step: AIC=1274.14 y ~ v1 + m + b Df Deviance AIC - v1 1 1267.1 1273.1 1266.1 1274.1 - m 1 1303.6 1309.6 - b 1 1337.2 1343.2 Step: AIC=1273.1 y ~ m + b Df Deviance AIC 1267.1 1273.1 - m 1 1304.0 1308.0 - b 1 1337.9 1341.9 Start: AIC=1279.22 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1260.1 1272.1 - co 1 1259.6 1277.6 - v2 1 1259.9 1277.9 - v1 1 1260.6 1278.6 1259.2 1279.2 - m 1 1283.7 1301.7 - b 1 1350.4 1368.4 Step: AIC=1272.09 y ~ v1 + v2 + m + b + co Df Deviance AIC - co 1 1260.4 1270.4 - v2 1 1260.8 1270.8 - v1 1 1261.5 1271.5 1260.1 1272.1 - m 1 1284.6 1294.6 - b 1 1351.0 1361.0 Step: AIC=1270.44 y ~ v1 + v2 + m + b Df Deviance AIC - v2 1 1261.2 1269.2 - v1 1 1261.9 1269.9 1260.4 1270.4 - m 1 1284.8 1292.8 - b 1 1351.2 1359.2 Step: AIC=1269.16 y ~ v1 + m + b Df Deviance AIC - v1 1 1262.8 1268.8 1261.2 1269.2 - m 1 1285.7 1291.7 - b 1 1351.5 1357.5 Step: AIC=1268.75 y ~ m + b Df Deviance AIC 1262.8 1268.8 - m 1 1286.7 1290.7 - b 1 1352.8 1356.8 Start: AIC=1268.64 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1249.5 1261.5 - v2 1 1248.8 1266.8 - co 1 1249.1 1267.1 1248.6 1268.6 - v1 1 1251.1 1269.1 - m 1 1259.2 1277.2 - b 1 1369.2 1387.2 Step: AIC=1261.48 y ~ v1 + v2 + m + b + co Df Deviance AIC - v2 1 1249.7 1259.7 - co 1 1249.9 1259.9 1249.5 1261.5 - v1 1 1251.9 1261.9 - m 1 1260.1 1270.1 - b 1 1369.7 1379.7 Step: AIC=1259.68 y ~ v1 + m + b + co Df Deviance AIC - co 1 1250.1 1258.1 1249.7 1259.7 - v1 1 1252.2 1260.2 - m 1 1260.3 1268.3 - b 1 1369.7 1377.7 Step: AIC=1258.1 y ~ v1 + m + b Df Deviance AIC 1250.1 1258.1 - v1 1 1252.7 1258.7 - m 1 1260.6 1266.6 - b 1 1369.9 1375.9 Start: AIC=1260.47 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1240.8 1252.8 - co 1 1241.0 1259.0 - v2 1 1241.0 1259.0 1240.5 1260.5 - v1 1 1243.0 1261.0 - m 1 1244.5 1262.5 - b 1 1377.9 1395.9 Step: AIC=1252.82 y ~ v1 + v2 + m + b + co Df Deviance AIC - co 1 1241.3 1251.3 - v2 1 1241.4 1251.4 1240.8 1252.8 - v1 1 1243.3 1253.3 - m 1 1244.8 1254.8 - b 1 1378.3 1388.3 Step: AIC=1251.3 y ~ v1 + v2 + m + b Df Deviance AIC - v2 1 1241.9 1249.9 1241.3 1251.3 - v1 1 1243.8 1251.8 - m 1 1245.2 1253.2 - b 1 1378.4 1386.4 Step: AIC=1249.86 y ~ v1 + m + b Df Deviance AIC 1241.9 1249.9 - v1 1 1244.5 1250.5 - m 1 1245.8 1251.8 - b 1 1378.6 1384.6 Start: AIC=1259.73 y ~ v1 + v2 + m + b + c + co Df Deviance AIC - c 4 1240.0 1252.0 - v2 1 1240.2 1258.2 - co 1 1240.4 1258.4 - v1 1 1241.4 1259.4 1239.7 1259.7 - m 1 1242.5 1260.5 - b 1 1380.0 1398.0 Step: AIC=1252 y ~ v1 + v2 + m + b + co Df Deviance AIC - v2 1 1240.5 1250.5 - co 1 1240.6 1250.6 - v1 1 1241.8 1251.8 1240.0 1252.0 - m 1 1242.8 1252.8 - b 1 1380.3 1390.3 Step: AIC=1250.49 y ~ v1 + m + b + co Df Deviance AIC - co 1 1241.1 1249.1 - v1 1 1242.3 1250.3 1240.5 1250.5 - m 1 1243.3 1251.3 - b 1 1380.5 1388.5 Step: AIC=1249.12 y ~ v1 + m + b Df Deviance AIC - v1 1 1243.0 1249.0 1241.1 1249.1 - m 1 1243.8 1249.8 - b 1 1380.7 1386.7 Step: AIC=1248.99 y ~ m + b Df Deviance AIC 1243.0 1249.0 - m 1 1245.5 1249.5 - b 1 1382.0 1386.0 Missings in variables: Variable Count NonD 14 Dream 12 Sleep 4 Span 4 Gest 4 Imputed missings in variables: Variable Count NonD 14 Dream 12 Sleep 4 Span 4 Gest 4 Time difference of 0.03119993 secs Time difference of 0.03119993 secs Time difference of 0.03119993 secs Time difference of 0.04680014 secs No missings in x. == Failed tests ================================================================ -- Failure (test_IRMI_ordered.R:10:3): irmi base ------------------------------- `ir <- irmi(test_df, mixed = "m", count = "co")` did not produce any warnings. -- Failure (test_IRMI_ordered.R:15:3): irmi step ------------------------------- `ir <- irmi(test_df, mixed = "m", count = "co", step = TRUE)` did not produce any warnings. -- Failure (test_IRMI_ordered.R:20:3): irmi step noise ------------------------- `ir <- irmi(test_df, mixed = "m", count = "co", step = TRUE, noise = TRUE)` did not produce any warnings. -- Failure (test_IRMI_ordered.R:25:3): irmi robust ----------------------------- `ir <- irmi(test_df, robust = TRUE, mixed = "m", count = "co")` did not produce any warnings. -- Failure (test_IRMI_ordered.R:34:3): irmi robust noise ----------------------- `... <- NULL` did not produce any warnings. -- Failure (test_IRMI_ordered.R:39:3): irmi robust noise with no imp_var ------- `... <- NULL` did not produce any warnings. [ FAIL 6 | WARN 0 | SKIP 0 | PASS 144 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [35s] OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs, 1 NOTE