* using log directory 'd:/Rcompile/CRANpkg/local/3.6/diveMove.Rcheck' * using R version 3.6.3 (2020-02-29) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'diveMove/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'diveMove' version '1.6.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'diveMove' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [20s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... ERROR Running examples in 'diveMove-Ex.R' failed The error most likely occurred in: > ### Name: fitMLEbouts,numeric-method > ### Title: Maximum Likelihood Model of mixtures of 2 or 3 Poisson Processes > ### Aliases: fitMLEbouts,numeric-method fitMLEbouts > ### fitMLEbouts,Bouts-method > ### Keywords: manip methods models > > ### ** Examples > > ## Run example to retrieve random samples for two- and three-process > ## Poisson mixtures with known parameters as 'Bouts' objects > ## ('xbouts2', and 'xbouts3'), as well as starting values from > ## broken-stick model ('startval2' and 'startval3') > utils::example("boutinit", package="diveMove", ask=FALSE) boutnt> ## 2-process boutnt> utils::example("rmixexp", package="diveMove", ask=FALSE) rmixxp> ## Draw samples from a mixture where the first process occurs with rmixxp> ## p < 0.7, and the second process occurs with the remaining rmixxp> ## probability. rmixxp> p <- 0.7 rmixxp> lda <- c(0.05, 0.005) rmixxp> (rndprocs2 <- rmixexp(1000, p, lda)) [1] 1.23235172 7.39443616 24.52561511 5.42041863 0.18020132 [6] 31.39302209 135.72156318 6.17779901 1.17725586 4.11015204 [11] 28.94059278 15.13581622 106.36562440 12.78407286 356.71755856 [16] 13.72322208 343.99833901 105.60777402 0.75752350 156.77767879 [21] 213.19194472 8.20301360 3.66141205 18.52611353 5.83367535 [26] 39.13407430 22.43737442 0.52072329 21.16421849 33.80405977 [31] 4.57387436 0.06545776 37.82490931 26.48013182 32.95521876 [36] 18.57726881 145.01201135 1.39446919 260.76784468 33.84446584 [41] 100.87630628 26.10191978 22.78107740 47.24300105 53.77219899 [46] 338.39107527 1.26255605 2.22908690 30.60534362 111.58049076 [51] 4.76770413 260.63417382 7.01301342 74.57450203 20.88860163 [56] 23.01749172 5.55023879 56.51694402 7.84770354 12.62256699 [61] 2.96914140 47.31892543 17.21599056 17.83419382 8.17915286 [66] 10.86699792 90.82049592 35.17959539 26.74601322 434.18275754 [71] 27.68347198 31.68862781 7.61114744 88.41393031 7.44523577 [76] 116.66983841 2.99739549 18.50904353 94.88491090 182.40163083 [81] 10.98834807 483.95552329 13.31672699 10.33692620 38.59998200 [86] 15.62420247 202.56409663 1.52295461 26.34895110 16.31668597 [91] 6.38200054 12.64222019 27.55769119 333.36175902 169.51753794 [96] 120.85160334 34.00519632 11.59170941 9.68598798 19.46574382 [101] 15.87711064 12.07592153 54.87664882 135.24890663 46.95295039 [106] 8.70256268 3.45362257 81.13640170 294.17519842 48.57458267 [111] 164.69495594 26.63298352 20.14632780 5.23053734 15.72317302 [116] 7.49320624 296.44575937 12.40843087 10.50418768 20.19381301 [121] 453.96161710 5.86516300 11.59656446 28.29349145 213.90315927 [126] 19.22559003 35.56869417 31.70517720 4.52796916 71.38618301 [131] 42.74418581 11.15356166 2.87245930 20.37330963 102.62406430 [136] 28.35976639 9.65572100 9.33267157 97.89409889 15.63497136 [141] 9.44686141 43.10727831 16.32694919 26.79235831 5.38805278 [146] 3.50911109 70.67643662 52.11631544 12.74007338 218.66276655 [151] 29.16327521 47.49071192 21.89840875 4.35621714 73.05412005 [156] 58.83680924 5.57379089 26.04986442 8.08360410 25.79610083 [161] 0.07833291 591.14974883 17.70100240 129.63195660 117.03814566 [166] 10.19108771 42.69815247 29.40665189 471.70871096 36.93596847 [171] 23.82816113 2.48347092 10.62527823 10.17068890 18.23084567 [176] 89.52386258 33.18038531 8.02320227 33.06594072 93.81923224 [181] 34.13429033 12.11469717 84.79737258 0.10389729 232.02598075 [186] 9.67868621 104.83495621 147.20780346 142.57814120 7.15363240 [191] 146.33002163 12.06893255 14.30834279 237.11045384 14.15332992 [196] 40.54416485 1.05872038 6.32955041 4.01220778 138.85710185 [201] 0.03855076 6.78418824 7.79428427 11.30041257 29.96954251 [206] 33.84519558 10.38171641 15.31179950 13.42195589 205.78892565 [211] 396.48957400 7.78181906 342.66489258 452.57280057 599.22935065 [216] 13.84080866 23.74679940 12.52070187 101.72909442 4.23563252 [221] 1.13651186 3.87805536 43.31654554 17.78045598 340.83429611 [226] 44.82388507 36.66777686 45.86882014 35.35931475 310.33144480 [231] 25.21503836 35.50826405 53.19181908 33.15253384 11.91450299 [236] 42.08150923 18.99640480 2.27557097 22.22257685 30.64881708 [241] 2.68541851 20.59083624 451.35724903 13.25279717 11.32895666 [246] 2.06537092 3.62704340 12.95850403 5.27541461 142.03699629 [251] 201.67593825 371.20169195 1.03733215 2.30746656 27.82704194 [256] 16.20890718 9.75131424 5.27304960 36.70581515 241.02848246 [261] 20.71689541 67.64954894 28.62536572 335.56017799 502.13841980 [266] 26.15207067 42.02398855 24.80236897 20.78487225 1.62569124 [271] 5.36330615 24.63787092 9.43561374 14.16670887 26.35071397 [276] 84.70879321 23.58507546 12.23662217 83.46014119 134.60482368 [281] 24.01007796 24.68282627 65.94245159 3.60317984 7.50799338 [286] 16.88529095 3.59610969 19.57010822 34.06873755 8.58910901 [291] 1.12663005 28.61909971 122.45814474 41.89085209 22.77308030 [296] 9.29120200 18.87278696 18.46260544 30.76991398 179.36603780 [301] 33.74217473 13.57886313 6.57229909 29.94465612 19.93348872 [306] 132.57208755 12.90156418 316.29874481 27.56531877 19.61602815 [311] 7.59568647 8.67683508 948.68336687 596.62621465 50.66960338 [316] 25.76886101 6.16766005 8.45880958 344.06903273 1.23636019 [321] 2.88986855 6.91443307 12.22349599 148.73238305 395.45536226 [326] 13.83590344 553.68731951 245.82544993 9.90823698 78.31639918 [331] 530.74197878 4.46127173 76.09904300 59.88489967 5.37122748 [336] 11.72284408 26.35866834 14.13085602 27.40726273 240.14289984 [341] 536.06401940 13.30363348 21.76137713 3.93401933 9.58425991 [346] 44.22645505 1.84960187 4.01632130 28.99965346 3.72493491 [351] 23.22693622 124.74211424 661.58885058 5.72582409 65.84820910 [356] 6.31344268 338.57159836 52.05102961 33.25431404 4.84714469 [361] 3.10077201 10.79265862 6.07101388 9.04216220 12.54546350 [366] 227.78754643 50.67550156 29.86211618 6.18921654 12.88819105 [371] 24.26567401 29.09479715 341.76885836 11.36559786 2.67604630 [376] 4.61908645 11.79201160 195.82617436 31.98954034 12.29843382 [381] 15.39187767 101.17771599 28.79636512 298.92056843 65.86750239 [386] 57.15985343 24.79684360 156.40780948 18.50787146 80.49857337 [391] 13.62139659 4.46425084 624.06659421 7.68690680 10.65319792 [396] 52.58444506 9.92065950 0.10630931 26.42019626 11.55053559 [401] 1.23880534 63.41971174 5.97349526 662.28944060 501.31591668 [406] 75.33020861 57.74843603 243.88994227 24.45994496 46.22192755 [411] 214.61875643 1.29115096 146.63672167 29.14424893 7.83073570 [416] 54.26522936 20.13029208 1.09481466 17.59342923 58.72787943 [421] 3.97136632 3.25513272 14.36589517 12.23130825 54.10751920 [426] 4.75100009 8.18935080 315.00036156 16.89427995 2.66160616 [431] 45.02308344 7.79927064 39.47700362 4.75958540 28.07556237 [436] 55.26277786 647.92595535 9.80915839 41.71178777 53.51545727 [441] 23.68301442 16.08054753 35.32724734 40.31966984 30.08394190 [446] 1.17986417 24.08836802 17.33740782 11.48043704 19.48802583 [451] 135.21540733 2.95894817 5.64466009 12.24541335 0.81267969 [456] 7.87531153 64.04154047 102.74172677 3.66694899 0.40561852 [461] 14.21619867 3.69621989 47.37106699 20.27426869 4.25142098 [466] 29.51655900 38.79535375 2.80068550 28.23404425 5.02331260 [471] 18.81099054 354.78214881 204.49046738 3.51599762 2.90149517 [476] 6.19670963 55.01458931 24.33312403 34.94001202 28.88355610 [481] 386.12929767 45.49132529 42.00640321 308.99081789 25.13695795 [486] 21.69541668 1.55319205 37.58573841 98.21740920 6.85816309 [491] 35.85430112 41.19785847 0.25485043 36.42841399 17.81423468 [496] 16.02006851 60.37757425 4.17091321 156.87675302 23.21009438 [501] 31.85793441 28.42724650 3.75973187 32.24599097 10.51122900 [506] 24.12125997 19.60269619 32.93077471 442.87192260 2.82576052 [511] 24.27090025 23.72326286 14.54050617 58.33688357 101.86601905 [516] 26.83440797 0.57667328 1.69138874 1.02083882 0.90648809 [521] 282.72248021 163.24980123 43.76465311 25.29746776 8.79663405 [526] 573.20987579 127.99747242 75.05446505 139.75894759 275.51435082 [531] 11.47827632 3.82368491 7.25417920 49.66000180 14.35190206 [536] 22.39127323 30.15215865 10.02060936 21.65844742 12.27497937 [541] 14.00408186 37.18542159 32.72040456 35.75143147 33.10992846 [546] 1.68915880 102.11516824 18.72501032 74.74237632 72.91322453 [551] 148.92181024 23.56921170 18.23219251 33.95632096 46.76983425 [556] 2.67634435 27.12414214 13.30642659 323.19101317 63.45961727 [561] 125.79574551 19.49901789 0.17401473 345.47004280 51.05364723 [566] 107.56264064 16.73126351 0.94649235 47.27150595 938.53036722 [571] 47.17360306 23.09653148 23.23097598 12.40232229 467.65631994 [576] 34.75219779 58.96076262 27.74478907 298.02036523 59.23886448 [581] 17.87861495 169.13049965 1.03058085 46.49195712 7.14215341 [586] 36.83784187 1.19217820 12.06715316 189.17919285 76.50936469 [591] 10.92178090 14.80643421 71.50406120 2.87523474 341.17527600 [596] 11.30885428 143.42113457 10.02493520 13.22929750 19.03664252 [601] 84.81326401 139.99867550 18.61074347 78.38193886 277.10595372 [606] 74.08355910 13.82175914 24.02527001 342.92875787 38.00557181 [611] 46.78788310 43.69129549 31.09183541 12.01801138 150.03786300 [616] 3.33806550 44.10450939 1.10650623 14.53101787 11.65084860 [621] 39.54747347 70.78757215 80.17729472 13.63591071 19.97493768 [626] 17.40675539 12.91591919 27.01073758 89.21599246 689.93143138 [631] 92.14815255 45.07521387 44.10295132 54.86878688 26.92741329 [636] 14.97539452 11.76284076 50.74001986 15.99751782 29.52676054 [641] 65.39043803 1.64088339 112.21445892 42.57385920 113.51003693 [646] 46.59819265 1.45866031 327.44536100 14.78900131 109.51654706 [651] 3.79036282 521.09380176 33.08075663 8.04362860 15.39756171 [656] 17.60934871 2.50661169 21.47706460 29.79002797 123.92275101 [661] 90.44970847 69.99582248 5.65731155 12.31405255 68.90356496 [666] 6.89624861 399.21408890 7.23989277 1.89216735 4.38310961 [671] 185.17583328 33.97567358 24.54721476 7.40418867 10.83924429 [676] 57.56909623 2.34641124 51.10296388 2.41399041 3.02304179 [681] 6.70006201 63.21943291 3.53586321 47.16469642 32.70768776 [686] 4.08618845 7.47324261 25.92907669 25.61023449 36.77077029 [691] 36.71322707 4.80562589 136.83457673 89.11092974 28.40039353 [696] 3.04113998 873.36748610 46.93746935 106.98034065 56.75600230 [701] 109.98082571 253.79714015 113.92690344 56.78444370 23.15506985 [706] 40.95603760 6.11516557 12.15472466 342.27211623 407.04857184 [711] 217.49877817 15.29327684 53.77376135 23.41373268 0.74284533 [716] 55.90196620 26.93881599 8.43218926 19.12676875 111.98733700 [721] 3.83416469 6.11499767 101.88961411 35.48255274 23.21478926 [726] 3.75641044 30.80254540 15.19530646 35.53723324 4.74742490 [731] 165.61318039 9.90153933 25.14007790 2.61543982 53.33273159 [736] 10.55696672 32.16143083 232.86781049 0.38448496 14.11623248 [741] 12.37598236 1.71253206 7.61088710 5.95088503 50.85129235 [746] 3.82278339 1.78357379 55.72509808 23.10474364 2.91319910 [751] 50.69974913 333.38869473 15.78803199 8.70885342 20.53662931 [756] 1.17709536 3.73994995 10.39556048 608.57156512 5.24719809 [761] 349.81856084 8.29026343 150.40725581 47.29201343 8.52829078 [766] 10.03256489 34.96197130 296.23104391 63.86132529 145.51815677 [771] 13.71869981 144.82188327 21.90150548 306.27717759 17.84934707 [776] 1.44215327 10.34678194 270.41646465 27.81902818 138.71090560 [781] 319.96796638 23.29255478 379.49015720 38.37472267 1.39277522 [786] 47.54472006 11.78786202 2.85388920 1.59915539 33.48466281 [791] 20.67529038 3.42267334 104.45584072 6.06192624 75.91204624 [796] 52.27011967 6.32474610 11.46975444 398.90168308 18.87919966 [801] 11.90472376 37.00579718 12.96225647 217.12030470 0.40992647 [806] 11.68782745 17.83179685 754.58535108 11.19657428 16.30085664 [811] 47.21681583 46.27879377 18.83350735 194.67469307 17.56245903 [816] 38.93053520 35.61789915 16.74674386 65.24224564 138.72042526 [821] 1.32723464 11.08961484 740.56841244 461.66567257 78.67066786 [826] 22.15208780 26.35726904 18.50533551 9.56915818 103.15137718 [831] 11.97427134 51.39687748 24.57685632 338.50318080 1.08675206 [836] 0.21956433 24.26817831 94.77775330 162.26011793 6.25135488 [841] 111.89044109 8.88210023 3.81285516 25.61847359 2.36738315 [846] 3.02267440 4.66836757 7.61926696 322.77925981 1.91313262 [851] 584.59272679 222.64315597 24.17862987 45.91067927 0.24757762 [856] 20.89935426 20.19331586 29.31881538 67.90620237 25.93998261 [861] 14.71342711 34.71783664 56.18071763 11.78430361 55.71910351 [866] 1.73139220 71.83892082 11.06679592 102.92059733 90.18091715 [871] 12.71656328 58.54455524 273.08945655 19.83609162 10.63148904 [876] 8.18622053 0.77431278 9.44608540 80.08615708 26.33570042 [881] 23.23698409 22.76868382 37.73917557 70.39826503 4.11257827 [886] 75.21352778 46.51207440 4.19365738 5.81656239 12.01905333 [891] 23.58901052 28.26454934 6.06534259 11.98033493 34.36339333 [896] 20.24227288 3.57087760 17.69923257 10.74505137 17.22688227 [901] 174.77711587 19.33405631 12.06902835 20.68679342 1.89203711 [906] 67.84458324 7.40739341 1.04066274 24.69506074 28.40872088 [911] 1.10171362 226.70906297 0.64265991 33.70342523 3.21495171 [916] 50.63390407 6.24396645 224.63470268 281.49469469 193.96210119 [921] 1.36915804 10.40762495 450.56166833 5.86482932 141.19490288 [926] 384.68898757 246.07505257 18.45785754 1.13165013 9.12902727 [931] 1.83014765 43.38750225 1.31295479 16.31832004 359.75345707 [936] 61.21831127 324.27471388 6.90012565 94.71189557 31.95842076 [941] 39.04109590 38.06225214 13.59424198 30.74280973 10.28201485 [946] 22.67041910 33.98204513 264.20498434 20.37007886 48.23482875 [951] 11.70163972 9.35182147 10.06881358 9.78254369 5.19806494 [956] 14.65986870 156.53418277 0.50377508 2.69656237 26.00040523 [961] 19.45420689 14.68301985 12.89534089 4.19195105 6.85038244 [966] 22.57696691 9.53407586 139.05849735 140.72283739 199.95594862 [971] 68.85280488 9.93765215 21.25778390 162.83729839 9.49512456 [976] 5.07877583 5.34166825 35.85298163 34.69930462 73.27907672 [981] 48.90687140 31.55731827 35.64860951 2.46978331 30.35986312 [986] 53.39126717 17.09105994 31.87092362 396.77952824 0.45707795 [991] 31.87068865 3.10593053 20.70858680 24.50397480 3.39312843 [996] 12.52153113 39.26755728 22.89595526 37.79102892 10.74983870 rmixxp> ## 3-process rmixxp> p_f <- 0.6 # fast to slow rmixxp> p_svs <- 0.7 # prop of slow to (slow + very slow) procs rmixxp> p_true <- c(p_f, p_svs) rmixxp> lda_true <- c(0.05, 0.01, 8e-4) rmixxp> (rndprocs3 <- rmixexp(1000, p_true, lda_true)) [1] 1.636879e+01 1.168547e+01 5.727896e+02 1.361505e+01 1.492805e+01 [6] 3.894625e+01 4.219915e+00 1.317828e+01 3.279384e+01 1.288953e+01 [11] 1.437416e+01 4.212292e+01 3.830252e+00 2.198537e+01 1.068208e+01 [16] 4.760101e+00 1.738753e+01 1.646667e+01 6.876865e+01 3.017594e+01 [21] 3.225499e+00 1.230965e+01 5.712338e+01 1.012069e+01 8.403804e+01 [26] 9.138772e+00 1.175945e+02 1.873955e+02 1.105653e+02 6.975133e+00 [31] 1.282795e+01 1.108896e+02 2.707522e+01 7.022047e+00 2.796125e+01 [36] 9.702391e+01 6.389268e+00 3.402486e+01 1.436688e+01 1.614905e+01 [41] 3.008368e+01 9.603834e+00 9.583668e+01 5.253444e+01 2.422525e-01 [46] 7.025634e+02 1.456073e+01 6.247050e+02 5.800990e+00 2.016964e+00 [51] 1.787990e+01 2.500248e+01 1.035390e+02 4.280734e+01 2.762872e+01 [56] 7.331686e+01 7.851863e+01 6.840130e+01 9.351063e+01 1.002579e+02 [61] 1.692306e+01 3.634488e+00 3.487736e-01 1.133370e+01 2.208065e+03 [66] 1.915109e+01 3.943642e+01 2.236978e+00 2.823103e-01 4.464291e+01 [71] 2.379794e+01 1.622908e+01 2.404874e+00 8.471348e+00 8.889192e+02 [76] 2.022567e+01 1.078574e+02 1.067291e+01 8.291542e+01 9.930199e+00 [81] 4.510694e+00 5.120572e-01 1.150789e+01 3.158661e+00 4.944444e+02 [86] 4.368550e+02 2.159005e+02 9.038838e+00 2.333803e+02 1.031960e+02 [91] 2.245032e+01 3.273962e+01 3.929666e+01 8.286894e+01 2.231185e+02 [96] 3.273303e+00 4.168283e+00 3.914496e-01 3.990569e+02 1.618102e+01 [101] 1.989747e+01 6.103124e+01 2.081585e+01 1.443994e+00 1.710211e+01 [106] 1.091767e+01 1.513582e+01 1.757345e+00 3.086051e+01 2.247051e+01 [111] 2.757771e+00 7.956489e+01 7.101454e+00 1.457501e+02 2.393467e+01 [116] 1.367667e+01 1.544813e+00 1.589624e+01 3.681539e+01 2.644252e+01 [121] 8.403743e+01 1.145191e+01 1.294328e+01 1.508407e+01 6.544260e+01 [126] 9.920094e+01 5.076547e-01 1.285642e+02 1.538538e+01 1.521254e+01 [131] 1.924507e+01 3.032309e+00 6.540322e+00 7.283783e+02 4.479351e+01 [136] 1.486372e+01 3.650900e+00 5.017756e-02 6.981192e+00 3.965231e+01 [141] 4.590557e+00 3.135120e+01 7.583459e+01 3.379038e+02 1.247410e+01 [146] 2.681761e+01 3.578058e+00 5.970908e+01 1.053269e+03 1.790837e+01 [151] 1.037392e+01 1.994890e+02 5.139214e+00 1.724095e+01 2.837676e+01 [156] 1.253137e+02 5.708383e+01 2.099505e+02 1.257118e+01 2.891236e+00 [161] 2.930115e+01 4.250603e-01 2.664157e+02 6.796347e+00 1.642791e+01 [166] 7.634139e+00 3.018546e+01 1.754475e+01 1.100939e+01 1.870254e+02 [171] 1.567602e+03 1.839117e+00 8.478833e+00 5.770892e+00 3.242565e+01 [176] 9.464497e+01 4.790417e+01 3.818601e+00 4.344243e+01 1.242369e+01 [181] 4.714257e+01 3.248092e+01 2.156180e+02 7.015776e+01 1.648538e+03 [186] 2.679517e+01 3.069350e+00 1.365831e+00 8.300527e+01 1.204300e+01 [191] 1.327179e+01 3.596771e+01 2.714610e+01 1.335543e+03 1.100807e+03 [196] 8.053340e+02 1.759712e-01 9.104714e+01 3.584671e+01 1.389366e+02 [201] 2.406537e+01 4.290093e+02 3.776884e+01 1.189756e+01 3.809743e+02 [206] 1.522345e+03 3.964275e+01 7.550632e+00 1.103272e+03 2.904356e+01 [211] 2.630351e+00 7.091364e+01 3.970651e+01 2.726965e+01 4.060686e+01 [216] 1.202033e+02 4.605338e+01 3.092173e+01 2.143678e+00 3.234851e+01 [221] 9.425900e+00 1.497481e+03 5.513778e+01 1.843432e+01 1.148393e+01 [226] 1.912271e+02 1.165839e+02 5.738232e-01 1.317025e+01 2.494694e+03 [231] 1.714946e+01 5.844127e+00 1.129539e+01 8.491537e+01 2.065267e+01 [236] 4.590436e+03 6.378785e+01 1.108825e+01 1.576874e+02 6.007586e+01 [241] 5.579493e+01 7.260517e+01 3.206938e+01 5.320842e+01 1.141265e+02 [246] 3.832619e+01 1.729607e+01 4.086757e+01 6.655791e+01 2.163886e+02 [251] 5.582911e+01 1.832382e+01 2.638297e+01 2.729063e+01 3.119703e+02 [256] 1.744305e+01 4.430698e+03 5.501100e+00 1.118894e+01 6.219737e+00 [261] 1.035366e+01 8.435488e+00 7.749319e-01 3.148183e+01 7.933687e+01 [266] 3.624276e+01 7.844075e+01 7.316398e+01 4.876699e+00 2.330945e+02 [271] 6.398285e+00 5.733193e+02 2.763063e+03 1.908485e+01 5.064416e+01 [276] 3.197058e+02 7.091798e+01 2.080823e+01 2.350497e+01 1.737829e+02 [281] 4.007229e+02 1.967292e+01 1.867645e+03 4.878656e+01 1.466652e+01 [286] 2.468646e+01 3.297368e+00 2.933968e+02 2.313035e+01 1.426927e+01 [291] 1.950101e+01 3.289785e+01 2.098547e+01 1.230117e+01 8.975205e+00 [296] 5.783810e+00 2.624158e+01 1.202947e+02 9.969642e+02 7.621740e+00 [301] 1.764299e+01 3.413469e+01 6.221966e+01 1.619572e+01 1.028745e+02 [306] 1.304884e+02 1.754104e+01 1.436718e+01 5.052653e+01 2.108924e+03 [311] 5.355508e+00 3.114175e+00 6.861446e+01 4.396551e+01 2.675377e+01 [316] 2.441947e+01 8.680331e+01 4.267506e-01 7.336454e+01 4.975517e-01 [321] 6.234994e+00 3.026609e+01 1.162377e+02 2.807290e+01 7.695794e+00 [326] 1.780694e+01 5.646402e+00 1.877100e+02 1.502055e+01 2.476496e+02 [331] 1.530531e+02 1.193882e+01 2.585762e+02 8.456670e+00 4.098674e+01 [336] 3.399235e+02 5.447979e+00 3.898325e+00 3.773820e+00 3.247036e+01 [341] 1.470874e+02 8.160353e+00 8.367463e+00 2.459289e+01 7.891074e-01 [346] 7.907219e+01 9.905761e+01 1.575828e+01 9.787816e+00 2.601343e+00 [351] 4.357604e+01 1.731230e+03 5.336820e+00 9.244847e+00 1.304545e+02 [356] 8.504262e+00 3.850948e+01 4.184076e+02 8.027887e-01 4.364552e+01 [361] 5.366422e+00 1.856597e+02 9.082636e+02 1.402025e+01 1.396178e+01 [366] 2.787470e+02 7.208101e+02 1.467708e+00 1.246525e+01 2.111526e+02 [371] 1.094594e+02 2.222481e+03 9.204398e+00 1.864169e+01 3.375632e+01 [376] 1.980121e+01 6.647745e+02 1.492858e+01 2.445519e+01 1.936224e+00 [381] 1.631364e+01 3.822427e+01 1.860236e+01 2.537960e+01 4.762709e+01 [386] 1.010621e+01 2.071457e+01 4.893025e+00 2.695759e+01 3.608137e+01 [391] 2.308528e+00 4.833329e+00 1.294474e+01 1.461066e+01 1.422774e+01 [396] 5.359999e+01 1.292207e+01 6.836202e+00 4.566023e+01 5.957725e+00 [401] 6.581755e+00 2.210706e+02 3.403880e+01 5.339334e+01 9.293425e+00 [406] 1.911613e+01 1.286065e+03 2.254435e+01 2.209014e+01 1.507472e+01 [411] 1.251671e+01 1.988453e+00 3.685204e+01 1.287141e+01 1.093818e+01 [416] 3.674545e+03 6.308207e+01 6.214633e+01 2.260001e+02 5.130183e+01 [421] 3.188266e+02 2.772477e+01 2.431066e+00 2.436896e+01 2.759894e+01 [426] 7.083718e+02 3.497244e+02 1.206804e+00 9.924089e-02 3.521654e+00 [431] 1.150606e+02 7.270524e+02 1.652112e+01 1.148592e+02 1.054677e+02 [436] 2.942689e+01 6.329593e+01 7.400316e+01 3.367493e+00 7.607456e+01 [441] 1.277540e+02 1.568679e+01 2.008601e+02 4.124568e+01 2.141080e+02 [446] 1.385120e+00 1.547968e+01 2.645312e+01 3.653293e+01 4.084889e+00 [451] 6.476480e+02 4.323904e+01 4.472102e+00 1.476624e+02 3.449641e+01 [456] 1.636823e+01 1.379304e+03 3.023023e+00 5.418859e+00 6.971160e+00 [461] 2.088616e+01 4.202085e+02 6.348216e+00 3.808680e+02 1.129699e+01 [466] 4.740497e+00 1.085735e+03 1.386759e+02 7.664930e+01 4.468817e+00 [471] 1.647534e+01 2.082149e+01 1.790956e+01 3.643877e+01 1.749058e+02 [476] 6.759307e+00 1.120324e+02 2.187337e+01 4.940374e+00 1.200844e+01 [481] 3.696149e+01 2.111665e+01 3.480534e+01 6.428220e+01 5.349279e+02 [486] 1.332286e+00 4.464289e+01 1.902439e+01 3.257082e+02 1.832129e+02 [491] 8.828177e+01 7.254785e+01 8.147324e+00 1.291761e+02 8.346995e+01 [496] 5.276454e+01 4.296622e+02 2.070641e+01 4.781180e+00 9.548949e-01 [501] 6.034167e+03 5.039247e+01 4.984740e+01 1.707115e+01 7.220290e+02 [506] 5.417017e+01 8.801766e+00 7.299364e-01 2.051052e+01 6.436147e+01 [511] 6.817713e+01 3.942027e+01 2.597114e+01 1.774695e+01 6.025092e+00 [516] 4.462797e+02 3.341356e+01 2.850145e+01 4.200709e+01 3.853616e+02 [521] 7.385462e+01 3.523484e+00 4.126339e+01 1.416076e+01 2.613886e+01 [526] 1.252595e+02 2.386162e+02 3.259752e+01 1.420408e+01 9.594025e+00 [531] 5.621066e+00 1.526531e+01 3.152829e+01 1.039462e+01 3.988317e+00 [536] 1.725614e+00 6.437558e+01 2.548963e+00 1.010938e+02 2.430677e+01 [541] 1.875309e-01 3.644641e+00 7.070394e+01 1.655039e+03 3.589073e+01 [546] 5.539879e+00 8.611326e+00 3.834475e+01 4.955155e+01 6.608420e+01 [551] 2.194384e+03 1.619770e+01 1.237363e+00 1.453725e+00 1.838755e+01 [556] 1.909812e+01 3.260261e+00 1.096903e+01 8.992346e+02 7.861727e+00 [561] 2.648284e+03 8.878385e+00 2.882547e+00 1.258862e+01 1.800375e+01 [566] 5.828785e+01 1.061388e+01 5.083550e+01 4.317430e+00 5.688948e+01 [571] 7.653510e+00 1.481634e+01 4.154252e+00 1.284084e+02 4.473938e+01 [576] 1.267885e+02 1.394353e+02 4.541629e+01 2.208160e+02 1.717882e+01 [581] 4.813298e+01 1.115016e+02 2.461636e+03 3.552135e+01 4.512945e+01 [586] 3.224178e+02 2.314199e+03 7.441584e+01 1.718150e+01 7.730894e+00 [591] 1.491609e+02 2.570497e+01 4.608783e+01 5.467350e+01 1.719758e+01 [596] 2.339394e+03 1.865676e+01 3.933709e+01 1.681017e+01 2.474953e+01 [601] 2.038647e+00 8.622968e+00 9.349561e-01 1.494945e+01 4.081990e+00 [606] 3.870486e+01 5.598392e+01 1.328566e+01 2.362921e+00 7.207151e+02 [611] 2.404093e+01 1.155983e+01 1.691743e+01 8.744722e+01 2.184190e+01 [616] 3.590592e+00 1.779586e+01 3.657236e+01 5.686361e-01 3.520894e+01 [621] 7.074108e+00 1.657094e+03 7.982109e-01 5.064677e+00 6.262093e+02 [626] 2.870515e+01 8.303758e+03 2.762700e+01 1.624640e+00 5.921134e+01 [631] 3.276042e+00 2.755666e+01 8.429071e+01 8.477740e+00 4.151988e+01 [636] 3.294984e+01 7.767805e+00 9.200134e+01 4.587483e+00 2.493035e+02 [641] 6.592578e+00 1.418503e+00 1.516791e+01 1.477287e+01 3.704645e+01 [646] 8.721305e+00 2.189291e+03 8.191802e+00 3.825986e+01 6.158122e+00 [651] 4.465405e+00 1.112642e+01 2.550888e+02 4.769829e+02 7.911194e-01 [656] 4.186181e+01 6.345145e+01 4.752984e+01 5.210523e+01 4.813126e+01 [661] 2.326664e+01 9.836598e-01 1.005972e+02 9.243633e+00 1.693193e+02 [666] 1.977896e+01 8.723914e+02 2.454294e+01 8.505447e+02 2.920461e+01 [671] 8.135723e+00 6.098300e-01 4.937127e+01 4.667080e+01 1.132762e+01 [676] 2.021363e+02 4.837541e+01 8.330242e+01 5.109837e+01 7.086361e+00 [681] 1.070431e+03 2.253453e+01 5.357319e+01 2.034128e+02 2.680907e+01 [686] 2.082578e+00 4.358905e-01 3.398105e+00 4.768456e+01 7.962809e+00 [691] 2.272725e+01 9.625162e+00 2.994760e+01 2.270480e+02 3.629022e+01 [696] 3.106106e+00 3.407364e+00 2.340090e+01 5.792378e+01 9.269931e+01 [701] 8.051592e+01 1.854167e+01 1.182170e+01 5.475539e+01 1.052476e+03 [706] 1.359185e+00 4.670906e+01 1.231770e+00 1.387123e+02 6.509167e+00 [711] 1.094845e+01 1.766438e+02 7.534465e+00 7.001628e+02 1.482143e+00 [716] 1.189867e+02 1.142132e+01 3.969170e+01 2.647721e+01 5.905119e+01 [721] 5.217631e+01 5.625584e+02 2.713808e+02 1.380951e+02 3.582926e+01 [726] 1.217259e+01 1.888729e+01 1.608852e+01 1.022077e+01 5.687990e+00 [731] 3.045977e+01 1.521110e+01 4.671596e+00 1.508738e+01 3.362849e+01 [736] 1.791857e+02 3.884469e+01 4.577196e+00 1.163813e+01 1.169593e+01 [741] 1.590407e+00 2.682489e+01 5.086659e+01 4.323861e+02 2.998765e+01 [746] 1.412907e+01 6.281651e+01 4.529248e+01 8.888791e+01 2.857319e+01 [751] 1.651180e+01 1.442846e+00 7.856340e+00 1.342881e+03 5.985258e+01 [756] 6.481658e+01 6.345736e+01 2.198211e+02 1.806692e+01 1.654965e+01 [761] 2.227622e+01 4.914569e+00 6.898792e+01 3.211385e+02 8.245563e+01 [766] 5.120474e+00 7.605570e+01 2.788613e+00 1.607510e+01 9.120824e+00 [771] 3.741119e+02 1.108389e+01 5.074355e+01 7.350055e+01 1.125730e+01 [776] 1.522540e+01 5.082086e+01 1.102920e+03 3.635717e+03 2.231924e+01 [781] 3.213401e+01 1.218229e+02 9.920556e+02 2.828775e+02 2.539100e+02 [786] 3.950088e+01 3.609173e+01 1.488012e+01 2.980202e+01 1.712972e+01 [791] 2.606150e+01 8.456681e+02 1.107403e+01 1.319336e+01 1.904563e+01 [796] 6.345379e+01 1.103090e+01 4.615653e+00 2.543709e+03 1.388515e+02 [801] 5.966949e+00 3.505461e+01 6.601499e+00 1.405929e+01 3.255605e+03 [806] 4.090023e+01 1.073340e+02 1.042158e+00 4.322291e+02 3.901416e+03 [811] 1.365471e+03 1.784239e+02 4.521865e+00 3.848364e+00 1.000524e+02 [816] 5.266322e+02 3.358601e+01 1.775482e+03 2.670645e+00 1.835728e+01 [821] 2.714096e+01 1.659378e+01 5.274773e+01 2.083232e+02 8.164395e+00 [826] 2.221224e+01 1.147865e+03 5.327564e+01 9.659809e+00 7.095614e+02 [831] 7.456669e+00 8.535633e+00 4.850388e+01 2.052778e+01 3.337394e+01 [836] 1.056309e+02 6.113570e+02 8.082344e+02 2.649005e+01 2.459421e+01 [841] 5.441385e+01 6.306201e+00 5.144326e+02 1.434452e+02 2.501009e+03 [846] 8.082255e+01 2.144788e+00 5.280628e+00 2.490645e+01 7.498498e+00 [851] 3.592747e+01 1.403750e+03 2.920938e+01 2.322363e+01 1.928410e+01 [856] 8.073215e+01 4.882149e+00 1.235104e+01 1.419739e+01 1.049393e+01 [861] 3.086542e+01 1.097193e+01 1.707247e+02 4.077078e+00 1.684567e+01 [866] 7.252723e+01 2.675662e+02 1.608234e+03 5.818914e+00 2.136754e+01 [871] 4.184882e+01 2.765468e+01 4.811521e+00 1.973192e+01 8.820572e+02 [876] 1.113403e+02 1.707781e+01 4.101013e+01 1.000420e+01 8.824282e+01 [881] 3.132175e+01 2.006091e+00 4.834129e+00 1.239695e+01 1.122761e+03 [886] 9.592099e+01 1.984687e+01 9.505125e+01 8.594741e+02 1.246146e+00 [891] 2.748681e+01 7.391627e+01 1.291077e+01 4.103934e+00 4.378285e+02 [896] 1.726710e+02 1.947486e+02 5.697171e+00 8.932555e-01 5.065850e+01 [901] 3.475932e+00 3.008331e+00 1.234760e+00 1.066036e+02 1.138437e+01 [906] 3.315324e+01 1.385647e+00 3.185063e+00 5.606821e-01 5.980065e+01 [911] 2.133715e+01 9.659963e+01 3.065999e+02 4.496987e+01 9.173046e+01 [916] 5.654136e+00 6.748829e+01 7.425704e+00 2.906498e+01 1.067510e+01 [921] 8.237936e+00 8.420145e+00 5.647139e+01 1.205118e+01 4.682776e+01 [926] 1.210546e+01 9.600530e+00 2.481966e+01 1.274411e+01 3.174840e+01 [931] 2.021779e+00 1.125853e+02 4.194707e+00 3.377161e+01 1.495028e-01 [936] 3.580019e-01 1.762504e+01 5.056806e+01 2.029355e+02 9.389441e+00 [941] 1.540601e+01 3.131130e+01 3.027188e+01 1.727118e+03 3.797137e+00 [946] 1.645149e+01 9.112509e+01 1.367046e+03 6.341065e+02 5.818832e+00 [951] 3.230614e+01 1.740642e+03 4.066555e+00 7.391655e+00 5.243520e+00 [956] 1.198822e+01 1.180793e+01 5.012309e+01 6.731854e+00 5.673616e+00 [961] 1.591551e+01 4.499119e+00 2.181338e+02 2.135720e+02 2.627566e+00 [966] 2.074161e+00 7.012194e+00 1.746757e+01 9.566916e+00 6.818406e+01 [971] 3.188648e+01 1.217066e+02 1.823184e+01 1.400848e+01 4.329180e+00 [976] 8.781575e+01 2.389950e+01 1.549799e+01 4.544346e+02 1.803696e+01 [981] 5.983288e+00 2.686368e+01 2.532056e+02 8.538412e+01 4.387176e+02 [986] 2.030361e+01 1.980926e+01 1.042166e+03 1.009552e+03 4.129851e+00 [991] 1.168747e+01 4.773220e+00 1.213882e+03 2.578756e+00 2.440299e+01 [996] 8.674346e+00 2.158236e+00 1.905446e+01 1.296495e+01 3.909330e+01 boutnt> ## 'rndproc2' is a random sample vector from the example boutnt> xbouts2 <- boutfreqs(rndprocs2, 5) # Bouts class result boutnt> (startval2 <- boutinit(xbouts2, 80)) [2.54,80] (80,948] a 4.069680e+03 1.350131e+03 lambda 3.938513e-02 4.387283e-03 boutnt> ## 3-process boutnt> ## 'rndproc3' is a random sample vector from the example boutnt> xbouts3 <- boutfreqs(rndprocs3, 5) boutnt> (startval3 <- boutinit(xbouts3, c(75, 220))) [2.55,75] (75,220] (220,8.3e+03] a 3.861946e+03 1.549852e+03 1.140873e+03 lambda 3.620585e-02 1.115144e-02 9.094169e-04 > > ## 2-process > opts0 <- list(method="L-BFGS-B", lower=c(-2, -5, -10)) > opts1 <- list(method="L-BFGS-B", lower=c(1e-1, 1e-3, 1e-6)) > bouts2.fit <- fitMLEbouts(xbouts2, start=startval2, optim_opts0=opts0, + optim_opts1=opts1) Error in mle(function (p, lambda0, lambda1) : 'start' must be a named list Calls: fitMLEbouts ... fitMLEbouts -> fitMLEbouts -> .local -> do.call -> mle Execution halted ** running examples for arch 'x64' ... ERROR Running examples in 'diveMove-Ex.R' failed The error most likely occurred in: > ### Name: fitMLEbouts,numeric-method > ### Title: Maximum Likelihood Model of mixtures of 2 or 3 Poisson Processes > ### Aliases: fitMLEbouts,numeric-method fitMLEbouts > ### fitMLEbouts,Bouts-method > ### Keywords: manip methods models > > ### ** Examples > > ## Run example to retrieve random samples for two- and three-process > ## Poisson mixtures with known parameters as 'Bouts' objects > ## ('xbouts2', and 'xbouts3'), as well as starting values from > ## broken-stick model ('startval2' and 'startval3') > utils::example("boutinit", package="diveMove", ask=FALSE) boutnt> ## 2-process boutnt> utils::example("rmixexp", package="diveMove", ask=FALSE) rmixxp> ## Draw samples from a mixture where the first process occurs with rmixxp> ## p < 0.7, and the second process occurs with the remaining rmixxp> ## probability. rmixxp> p <- 0.7 rmixxp> lda <- c(0.05, 0.005) rmixxp> (rndprocs2 <- rmixexp(1000, p, lda)) [1] 1.23235172 7.39443616 24.52561511 5.42041863 0.18020132 [6] 31.39302209 135.72156318 6.17779901 1.17725586 4.11015204 [11] 28.94059278 15.13581622 106.36562440 12.78407286 356.71755856 [16] 13.72322208 343.99833901 105.60777402 0.75752350 156.77767879 [21] 213.19194472 8.20301360 3.66141205 18.52611353 5.83367535 [26] 39.13407430 22.43737442 0.52072329 21.16421849 33.80405977 [31] 4.57387436 0.06545776 37.82490931 26.48013182 32.95521876 [36] 18.57726881 145.01201135 1.39446919 260.76784468 33.84446584 [41] 100.87630628 26.10191978 22.78107740 47.24300105 53.77219899 [46] 338.39107527 1.26255605 2.22908690 30.60534362 111.58049076 [51] 4.76770413 260.63417382 7.01301342 74.57450203 20.88860163 [56] 23.01749172 5.55023879 56.51694402 7.84770354 12.62256699 [61] 2.96914140 47.31892543 17.21599056 17.83419382 8.17915286 [66] 10.86699792 90.82049592 35.17959539 26.74601322 434.18275754 [71] 27.68347198 31.68862781 7.61114744 88.41393031 7.44523577 [76] 116.66983841 2.99739549 18.50904353 94.88491090 182.40163083 [81] 10.98834807 483.95552329 13.31672699 10.33692620 38.59998200 [86] 15.62420247 202.56409663 1.52295461 26.34895110 16.31668597 [91] 6.38200054 12.64222019 27.55769119 333.36175902 169.51753794 [96] 120.85160334 34.00519632 11.59170941 9.68598798 19.46574382 [101] 15.87711064 12.07592153 54.87664882 135.24890663 46.95295039 [106] 8.70256268 3.45362257 81.13640170 294.17519842 48.57458267 [111] 164.69495594 26.63298352 20.14632780 5.23053734 15.72317302 [116] 7.49320624 296.44575937 12.40843087 10.50418768 20.19381301 [121] 453.96161710 5.86516300 11.59656446 28.29349145 213.90315927 [126] 19.22559003 35.56869417 31.70517720 4.52796916 71.38618301 [131] 42.74418581 11.15356166 2.87245930 20.37330963 102.62406430 [136] 28.35976639 9.65572100 9.33267157 97.89409889 15.63497136 [141] 9.44686141 43.10727831 16.32694919 26.79235831 5.38805278 [146] 3.50911109 70.67643662 52.11631544 12.74007338 218.66276655 [151] 29.16327521 47.49071192 21.89840875 4.35621714 73.05412005 [156] 58.83680924 5.57379089 26.04986442 8.08360410 25.79610083 [161] 0.07833291 591.14974883 17.70100240 129.63195660 117.03814566 [166] 10.19108771 42.69815247 29.40665189 471.70871096 36.93596847 [171] 23.82816113 2.48347092 10.62527823 10.17068890 18.23084567 [176] 89.52386258 33.18038531 8.02320227 33.06594072 93.81923224 [181] 34.13429033 12.11469717 84.79737258 0.10389729 232.02598075 [186] 9.67868621 104.83495621 147.20780346 142.57814120 7.15363240 [191] 146.33002163 12.06893255 14.30834279 237.11045384 14.15332992 [196] 40.54416485 1.05872038 6.32955041 4.01220778 138.85710185 [201] 0.03855076 6.78418824 7.79428427 11.30041257 29.96954251 [206] 33.84519558 10.38171641 15.31179950 13.42195589 205.78892565 [211] 396.48957400 7.78181906 342.66489258 452.57280057 599.22935065 [216] 13.84080866 23.74679940 12.52070187 101.72909442 4.23563252 [221] 1.13651186 3.87805536 43.31654554 17.78045598 340.83429611 [226] 44.82388507 36.66777686 45.86882014 35.35931475 310.33144480 [231] 25.21503836 35.50826405 53.19181908 33.15253384 11.91450299 [236] 42.08150923 18.99640480 2.27557097 22.22257685 30.64881708 [241] 2.68541851 20.59083624 451.35724903 13.25279717 11.32895666 [246] 2.06537092 3.62704340 12.95850403 5.27541461 142.03699629 [251] 201.67593825 371.20169195 1.03733215 2.30746656 27.82704194 [256] 16.20890718 9.75131424 5.27304960 36.70581515 241.02848246 [261] 20.71689541 67.64954894 28.62536572 335.56017799 502.13841980 [266] 26.15207067 42.02398855 24.80236897 20.78487225 1.62569124 [271] 5.36330615 24.63787092 9.43561374 14.16670887 26.35071397 [276] 84.70879321 23.58507546 12.23662217 83.46014119 134.60482368 [281] 24.01007796 24.68282627 65.94245159 3.60317984 7.50799338 [286] 16.88529095 3.59610969 19.57010822 34.06873755 8.58910901 [291] 1.12663005 28.61909971 122.45814474 41.89085209 22.77308030 [296] 9.29120200 18.87278696 18.46260544 30.76991398 179.36603780 [301] 33.74217473 13.57886313 6.57229909 29.94465612 19.93348872 [306] 132.57208755 12.90156418 316.29874481 27.56531877 19.61602815 [311] 7.59568647 8.67683508 948.68336687 596.62621465 50.66960338 [316] 25.76886101 6.16766005 8.45880958 344.06903273 1.23636019 [321] 2.88986855 6.91443307 12.22349599 148.73238305 395.45536226 [326] 13.83590344 553.68731951 245.82544993 9.90823698 78.31639918 [331] 530.74197878 4.46127173 76.09904300 59.88489967 5.37122748 [336] 11.72284408 26.35866834 14.13085602 27.40726273 240.14289984 [341] 536.06401940 13.30363348 21.76137713 3.93401933 9.58425991 [346] 44.22645505 1.84960187 4.01632130 28.99965346 3.72493491 [351] 23.22693622 124.74211424 661.58885058 5.72582409 65.84820910 [356] 6.31344268 338.57159836 52.05102961 33.25431404 4.84714469 [361] 3.10077201 10.79265862 6.07101388 9.04216220 12.54546350 [366] 227.78754643 50.67550156 29.86211618 6.18921654 12.88819105 [371] 24.26567401 29.09479715 341.76885836 11.36559786 2.67604630 [376] 4.61908645 11.79201160 195.82617436 31.98954034 12.29843382 [381] 15.39187767 101.17771599 28.79636512 298.92056843 65.86750239 [386] 57.15985343 24.79684360 156.40780948 18.50787146 80.49857337 [391] 13.62139659 4.46425084 624.06659421 7.68690680 10.65319792 [396] 52.58444506 9.92065950 0.10630931 26.42019626 11.55053559 [401] 1.23880534 63.41971174 5.97349526 662.28944060 501.31591668 [406] 75.33020861 57.74843603 243.88994227 24.45994496 46.22192755 [411] 214.61875643 1.29115096 146.63672167 29.14424893 7.83073570 [416] 54.26522936 20.13029208 1.09481466 17.59342923 58.72787943 [421] 3.97136632 3.25513272 14.36589517 12.23130825 54.10751920 [426] 4.75100009 8.18935080 315.00036156 16.89427995 2.66160616 [431] 45.02308344 7.79927064 39.47700362 4.75958540 28.07556237 [436] 55.26277786 647.92595535 9.80915839 41.71178777 53.51545727 [441] 23.68301442 16.08054753 35.32724734 40.31966984 30.08394190 [446] 1.17986417 24.08836802 17.33740782 11.48043704 19.48802583 [451] 135.21540733 2.95894817 5.64466009 12.24541335 0.81267969 [456] 7.87531153 64.04154047 102.74172677 3.66694899 0.40561852 [461] 14.21619867 3.69621989 47.37106699 20.27426869 4.25142098 [466] 29.51655900 38.79535375 2.80068550 28.23404425 5.02331260 [471] 18.81099054 354.78214881 204.49046738 3.51599762 2.90149517 [476] 6.19670963 55.01458931 24.33312403 34.94001202 28.88355610 [481] 386.12929767 45.49132529 42.00640321 308.99081789 25.13695795 [486] 21.69541668 1.55319205 37.58573841 98.21740920 6.85816309 [491] 35.85430112 41.19785847 0.25485043 36.42841399 17.81423468 [496] 16.02006851 60.37757425 4.17091321 156.87675302 23.21009438 [501] 31.85793441 28.42724650 3.75973187 32.24599097 10.51122900 [506] 24.12125997 19.60269619 32.93077471 442.87192260 2.82576052 [511] 24.27090025 23.72326286 14.54050617 58.33688357 101.86601905 [516] 26.83440797 0.57667328 1.69138874 1.02083882 0.90648809 [521] 282.72248021 163.24980123 43.76465311 25.29746776 8.79663405 [526] 573.20987579 127.99747242 75.05446505 139.75894759 275.51435082 [531] 11.47827632 3.82368491 7.25417920 49.66000180 14.35190206 [536] 22.39127323 30.15215865 10.02060936 21.65844742 12.27497937 [541] 14.00408186 37.18542159 32.72040456 35.75143147 33.10992846 [546] 1.68915880 102.11516824 18.72501032 74.74237632 72.91322453 [551] 148.92181024 23.56921170 18.23219251 33.95632096 46.76983425 [556] 2.67634435 27.12414214 13.30642659 323.19101317 63.45961727 [561] 125.79574551 19.49901789 0.17401473 345.47004280 51.05364723 [566] 107.56264064 16.73126351 0.94649235 47.27150595 938.53036722 [571] 47.17360306 23.09653148 23.23097598 12.40232229 467.65631994 [576] 34.75219779 58.96076262 27.74478907 298.02036523 59.23886448 [581] 17.87861495 169.13049965 1.03058085 46.49195712 7.14215341 [586] 36.83784187 1.19217820 12.06715316 189.17919285 76.50936469 [591] 10.92178090 14.80643421 71.50406120 2.87523474 341.17527600 [596] 11.30885428 143.42113457 10.02493520 13.22929750 19.03664252 [601] 84.81326401 139.99867550 18.61074347 78.38193886 277.10595372 [606] 74.08355910 13.82175914 24.02527001 342.92875787 38.00557181 [611] 46.78788310 43.69129549 31.09183541 12.01801138 150.03786300 [616] 3.33806550 44.10450939 1.10650623 14.53101787 11.65084860 [621] 39.54747347 70.78757215 80.17729472 13.63591071 19.97493768 [626] 17.40675539 12.91591919 27.01073758 89.21599246 689.93143138 [631] 92.14815255 45.07521387 44.10295132 54.86878688 26.92741329 [636] 14.97539452 11.76284076 50.74001986 15.99751782 29.52676054 [641] 65.39043803 1.64088339 112.21445892 42.57385920 113.51003693 [646] 46.59819265 1.45866031 327.44536100 14.78900131 109.51654706 [651] 3.79036282 521.09380176 33.08075663 8.04362860 15.39756171 [656] 17.60934871 2.50661169 21.47706460 29.79002797 123.92275101 [661] 90.44970847 69.99582248 5.65731155 12.31405255 68.90356496 [666] 6.89624861 399.21408890 7.23989277 1.89216735 4.38310961 [671] 185.17583328 33.97567358 24.54721476 7.40418867 10.83924429 [676] 57.56909623 2.34641124 51.10296388 2.41399041 3.02304179 [681] 6.70006201 63.21943291 3.53586321 47.16469642 32.70768776 [686] 4.08618845 7.47324261 25.92907669 25.61023449 36.77077029 [691] 36.71322707 4.80562589 136.83457673 89.11092974 28.40039353 [696] 3.04113998 873.36748610 46.93746935 106.98034065 56.75600230 [701] 109.98082571 253.79714015 113.92690344 56.78444370 23.15506985 [706] 40.95603760 6.11516557 12.15472466 342.27211623 407.04857184 [711] 217.49877817 15.29327684 53.77376135 23.41373268 0.74284533 [716] 55.90196620 26.93881599 8.43218926 19.12676875 111.98733700 [721] 3.83416469 6.11499767 101.88961411 35.48255274 23.21478926 [726] 3.75641044 30.80254540 15.19530646 35.53723324 4.74742490 [731] 165.61318039 9.90153933 25.14007790 2.61543982 53.33273159 [736] 10.55696672 32.16143083 232.86781049 0.38448496 14.11623248 [741] 12.37598236 1.71253206 7.61088710 5.95088503 50.85129235 [746] 3.82278339 1.78357379 55.72509808 23.10474364 2.91319910 [751] 50.69974913 333.38869473 15.78803199 8.70885342 20.53662931 [756] 1.17709536 3.73994995 10.39556048 608.57156512 5.24719809 [761] 349.81856084 8.29026343 150.40725581 47.29201343 8.52829078 [766] 10.03256489 34.96197130 296.23104391 63.86132529 145.51815677 [771] 13.71869981 144.82188327 21.90150548 306.27717759 17.84934707 [776] 1.44215327 10.34678194 270.41646465 27.81902818 138.71090560 [781] 319.96796638 23.29255478 379.49015720 38.37472267 1.39277522 [786] 47.54472006 11.78786202 2.85388920 1.59915539 33.48466281 [791] 20.67529038 3.42267334 104.45584072 6.06192624 75.91204624 [796] 52.27011967 6.32474610 11.46975444 398.90168308 18.87919966 [801] 11.90472376 37.00579718 12.96225647 217.12030470 0.40992647 [806] 11.68782745 17.83179685 754.58535108 11.19657428 16.30085664 [811] 47.21681583 46.27879377 18.83350735 194.67469307 17.56245903 [816] 38.93053520 35.61789915 16.74674386 65.24224564 138.72042526 [821] 1.32723464 11.08961484 740.56841244 461.66567257 78.67066786 [826] 22.15208780 26.35726904 18.50533551 9.56915818 103.15137718 [831] 11.97427134 51.39687748 24.57685632 338.50318080 1.08675206 [836] 0.21956433 24.26817831 94.77775330 162.26011793 6.25135488 [841] 111.89044109 8.88210023 3.81285516 25.61847359 2.36738315 [846] 3.02267440 4.66836757 7.61926696 322.77925981 1.91313262 [851] 584.59272679 222.64315597 24.17862987 45.91067927 0.24757762 [856] 20.89935426 20.19331586 29.31881538 67.90620237 25.93998261 [861] 14.71342711 34.71783664 56.18071763 11.78430361 55.71910351 [866] 1.73139220 71.83892082 11.06679592 102.92059733 90.18091715 [871] 12.71656328 58.54455524 273.08945655 19.83609162 10.63148904 [876] 8.18622053 0.77431278 9.44608540 80.08615708 26.33570042 [881] 23.23698409 22.76868382 37.73917557 70.39826503 4.11257827 [886] 75.21352778 46.51207440 4.19365738 5.81656239 12.01905333 [891] 23.58901052 28.26454934 6.06534259 11.98033493 34.36339333 [896] 20.24227288 3.57087760 17.69923257 10.74505137 17.22688227 [901] 174.77711587 19.33405631 12.06902835 20.68679342 1.89203711 [906] 67.84458324 7.40739341 1.04066274 24.69506074 28.40872088 [911] 1.10171362 226.70906297 0.64265991 33.70342523 3.21495171 [916] 50.63390407 6.24396645 224.63470268 281.49469469 193.96210119 [921] 1.36915804 10.40762495 450.56166833 5.86482932 141.19490288 [926] 384.68898757 246.07505257 18.45785754 1.13165013 9.12902727 [931] 1.83014765 43.38750225 1.31295479 16.31832004 359.75345707 [936] 61.21831127 324.27471388 6.90012565 94.71189557 31.95842076 [941] 39.04109590 38.06225214 13.59424198 30.74280973 10.28201485 [946] 22.67041910 33.98204513 264.20498434 20.37007886 48.23482875 [951] 11.70163972 9.35182147 10.06881358 9.78254369 5.19806494 [956] 14.65986870 156.53418277 0.50377508 2.69656237 26.00040523 [961] 19.45420689 14.68301985 12.89534089 4.19195105 6.85038244 [966] 22.57696691 9.53407586 139.05849735 140.72283739 199.95594862 [971] 68.85280488 9.93765215 21.25778390 162.83729839 9.49512456 [976] 5.07877583 5.34166825 35.85298163 34.69930462 73.27907672 [981] 48.90687140 31.55731827 35.64860951 2.46978331 30.35986312 [986] 53.39126717 17.09105994 31.87092362 396.77952824 0.45707795 [991] 31.87068865 3.10593053 20.70858680 24.50397480 3.39312843 [996] 12.52153113 39.26755728 22.89595526 37.79102892 10.74983870 rmixxp> ## 3-process rmixxp> p_f <- 0.6 # fast to slow rmixxp> p_svs <- 0.7 # prop of slow to (slow + very slow) procs rmixxp> p_true <- c(p_f, p_svs) rmixxp> lda_true <- c(0.05, 0.01, 8e-4) rmixxp> (rndprocs3 <- rmixexp(1000, p_true, lda_true)) [1] 1.636879e+01 1.168547e+01 5.727896e+02 1.361505e+01 1.492805e+01 [6] 3.894625e+01 4.219915e+00 1.317828e+01 3.279384e+01 1.288953e+01 [11] 1.437416e+01 4.212292e+01 3.830252e+00 2.198537e+01 1.068208e+01 [16] 4.760101e+00 1.738753e+01 1.646667e+01 6.876865e+01 3.017594e+01 [21] 3.225499e+00 1.230965e+01 5.712338e+01 1.012069e+01 8.403804e+01 [26] 9.138772e+00 1.175945e+02 1.873955e+02 1.105653e+02 6.975133e+00 [31] 1.282795e+01 1.108896e+02 2.707522e+01 7.022047e+00 2.796125e+01 [36] 9.702391e+01 6.389268e+00 3.402486e+01 1.436688e+01 1.614905e+01 [41] 3.008368e+01 9.603834e+00 9.583668e+01 5.253444e+01 2.422525e-01 [46] 7.025634e+02 1.456073e+01 6.247050e+02 5.800990e+00 2.016964e+00 [51] 1.787990e+01 2.500248e+01 1.035390e+02 4.280734e+01 2.762872e+01 [56] 7.331686e+01 7.851863e+01 6.840130e+01 9.351063e+01 1.002579e+02 [61] 1.692306e+01 3.634488e+00 3.487736e-01 1.133370e+01 2.208065e+03 [66] 1.915109e+01 3.943642e+01 2.236978e+00 2.823103e-01 4.464291e+01 [71] 2.379794e+01 1.622908e+01 2.404874e+00 8.471348e+00 8.889192e+02 [76] 2.022567e+01 1.078574e+02 1.067291e+01 8.291542e+01 9.930199e+00 [81] 4.510694e+00 5.120572e-01 1.150789e+01 3.158661e+00 4.944444e+02 [86] 4.368550e+02 2.159005e+02 9.038838e+00 2.333803e+02 1.031960e+02 [91] 2.245032e+01 3.273962e+01 3.929666e+01 8.286894e+01 2.231185e+02 [96] 3.273303e+00 4.168283e+00 3.914496e-01 3.990569e+02 1.618102e+01 [101] 1.989747e+01 6.103124e+01 2.081585e+01 1.443994e+00 1.710211e+01 [106] 1.091767e+01 1.513582e+01 1.757345e+00 3.086051e+01 2.247051e+01 [111] 2.757771e+00 7.956489e+01 7.101454e+00 1.457501e+02 2.393467e+01 [116] 1.367667e+01 1.544813e+00 1.589624e+01 3.681539e+01 2.644252e+01 [121] 8.403743e+01 1.145191e+01 1.294328e+01 1.508407e+01 6.544260e+01 [126] 9.920094e+01 5.076547e-01 1.285642e+02 1.538538e+01 1.521254e+01 [131] 1.924507e+01 3.032309e+00 6.540322e+00 7.283783e+02 4.479351e+01 [136] 1.486372e+01 3.650900e+00 5.017756e-02 6.981192e+00 3.965231e+01 [141] 4.590557e+00 3.135120e+01 7.583459e+01 3.379038e+02 1.247410e+01 [146] 2.681761e+01 3.578058e+00 5.970908e+01 1.053269e+03 1.790837e+01 [151] 1.037392e+01 1.994890e+02 5.139214e+00 1.724095e+01 2.837676e+01 [156] 1.253137e+02 5.708383e+01 2.099505e+02 1.257118e+01 2.891236e+00 [161] 2.930115e+01 4.250603e-01 2.664157e+02 6.796347e+00 1.642791e+01 [166] 7.634139e+00 3.018546e+01 1.754475e+01 1.100939e+01 1.870254e+02 [171] 1.567602e+03 1.839117e+00 8.478833e+00 5.770892e+00 3.242565e+01 [176] 9.464497e+01 4.790417e+01 3.818601e+00 4.344243e+01 1.242369e+01 [181] 4.714257e+01 3.248092e+01 2.156180e+02 7.015776e+01 1.648538e+03 [186] 2.679517e+01 3.069350e+00 1.365831e+00 8.300527e+01 1.204300e+01 [191] 1.327179e+01 3.596771e+01 2.714610e+01 1.335543e+03 1.100807e+03 [196] 8.053340e+02 1.759712e-01 9.104714e+01 3.584671e+01 1.389366e+02 [201] 2.406537e+01 4.290093e+02 3.776884e+01 1.189756e+01 3.809743e+02 [206] 1.522345e+03 3.964275e+01 7.550632e+00 1.103272e+03 2.904356e+01 [211] 2.630351e+00 7.091364e+01 3.970651e+01 2.726965e+01 4.060686e+01 [216] 1.202033e+02 4.605338e+01 3.092173e+01 2.143678e+00 3.234851e+01 [221] 9.425900e+00 1.497481e+03 5.513778e+01 1.843432e+01 1.148393e+01 [226] 1.912271e+02 1.165839e+02 5.738232e-01 1.317025e+01 2.494694e+03 [231] 1.714946e+01 5.844127e+00 1.129539e+01 8.491537e+01 2.065267e+01 [236] 4.590436e+03 6.378785e+01 1.108825e+01 1.576874e+02 6.007586e+01 [241] 5.579493e+01 7.260517e+01 3.206938e+01 5.320842e+01 1.141265e+02 [246] 3.832619e+01 1.729607e+01 4.086757e+01 6.655791e+01 2.163886e+02 [251] 5.582911e+01 1.832382e+01 2.638297e+01 2.729063e+01 3.119703e+02 [256] 1.744305e+01 4.430698e+03 5.501100e+00 1.118894e+01 6.219737e+00 [261] 1.035366e+01 8.435488e+00 7.749319e-01 3.148183e+01 7.933687e+01 [266] 3.624276e+01 7.844075e+01 7.316398e+01 4.876699e+00 2.330945e+02 [271] 6.398285e+00 5.733193e+02 2.763063e+03 1.908485e+01 5.064416e+01 [276] 3.197058e+02 7.091798e+01 2.080823e+01 2.350497e+01 1.737829e+02 [281] 4.007229e+02 1.967292e+01 1.867645e+03 4.878656e+01 1.466652e+01 [286] 2.468646e+01 3.297368e+00 2.933968e+02 2.313035e+01 1.426927e+01 [291] 1.950101e+01 3.289785e+01 2.098547e+01 1.230117e+01 8.975205e+00 [296] 5.783810e+00 2.624158e+01 1.202947e+02 9.969642e+02 7.621740e+00 [301] 1.764299e+01 3.413469e+01 6.221966e+01 1.619572e+01 1.028745e+02 [306] 1.304884e+02 1.754104e+01 1.436718e+01 5.052653e+01 2.108924e+03 [311] 5.355508e+00 3.114175e+00 6.861446e+01 4.396551e+01 2.675377e+01 [316] 2.441947e+01 8.680331e+01 4.267506e-01 7.336454e+01 4.975517e-01 [321] 6.234994e+00 3.026609e+01 1.162377e+02 2.807290e+01 7.695794e+00 [326] 1.780694e+01 5.646402e+00 1.877100e+02 1.502055e+01 2.476496e+02 [331] 1.530531e+02 1.193882e+01 2.585762e+02 8.456670e+00 4.098674e+01 [336] 3.399235e+02 5.447979e+00 3.898325e+00 3.773820e+00 3.247036e+01 [341] 1.470874e+02 8.160353e+00 8.367463e+00 2.459289e+01 7.891074e-01 [346] 7.907219e+01 9.905761e+01 1.575828e+01 9.787816e+00 2.601343e+00 [351] 4.357604e+01 1.731230e+03 5.336820e+00 9.244847e+00 1.304545e+02 [356] 8.504262e+00 3.850948e+01 4.184076e+02 8.027887e-01 4.364552e+01 [361] 5.366422e+00 1.856597e+02 9.082636e+02 1.402025e+01 1.396178e+01 [366] 2.787470e+02 7.208101e+02 1.467708e+00 1.246525e+01 2.111526e+02 [371] 1.094594e+02 2.222481e+03 9.204398e+00 1.864169e+01 3.375632e+01 [376] 1.980121e+01 6.647745e+02 1.492858e+01 2.445519e+01 1.936224e+00 [381] 1.631364e+01 3.822427e+01 1.860236e+01 2.537960e+01 4.762709e+01 [386] 1.010621e+01 2.071457e+01 4.893025e+00 2.695759e+01 3.608137e+01 [391] 2.308528e+00 4.833329e+00 1.294474e+01 1.461066e+01 1.422774e+01 [396] 5.359999e+01 1.292207e+01 6.836202e+00 4.566023e+01 5.957725e+00 [401] 6.581755e+00 2.210706e+02 3.403880e+01 5.339334e+01 9.293425e+00 [406] 1.911613e+01 1.286065e+03 2.254435e+01 2.209014e+01 1.507472e+01 [411] 1.251671e+01 1.988453e+00 3.685204e+01 1.287141e+01 1.093818e+01 [416] 3.674545e+03 6.308207e+01 6.214633e+01 2.260001e+02 5.130183e+01 [421] 3.188266e+02 2.772477e+01 2.431066e+00 2.436896e+01 2.759894e+01 [426] 7.083718e+02 3.497244e+02 1.206804e+00 9.924089e-02 3.521654e+00 [431] 1.150606e+02 7.270524e+02 1.652112e+01 1.148592e+02 1.054677e+02 [436] 2.942689e+01 6.329593e+01 7.400316e+01 3.367493e+00 7.607456e+01 [441] 1.277540e+02 1.568679e+01 2.008601e+02 4.124568e+01 2.141080e+02 [446] 1.385120e+00 1.547968e+01 2.645312e+01 3.653293e+01 4.084889e+00 [451] 6.476480e+02 4.323904e+01 4.472102e+00 1.476624e+02 3.449641e+01 [456] 1.636823e+01 1.379304e+03 3.023023e+00 5.418859e+00 6.971160e+00 [461] 2.088616e+01 4.202085e+02 6.348216e+00 3.808680e+02 1.129699e+01 [466] 4.740497e+00 1.085735e+03 1.386759e+02 7.664930e+01 4.468817e+00 [471] 1.647534e+01 2.082149e+01 1.790956e+01 3.643877e+01 1.749058e+02 [476] 6.759307e+00 1.120324e+02 2.187337e+01 4.940374e+00 1.200844e+01 [481] 3.696149e+01 2.111665e+01 3.480534e+01 6.428220e+01 5.349279e+02 [486] 1.332286e+00 4.464289e+01 1.902439e+01 3.257082e+02 1.832129e+02 [491] 8.828177e+01 7.254785e+01 8.147324e+00 1.291761e+02 8.346995e+01 [496] 5.276454e+01 4.296622e+02 2.070641e+01 4.781180e+00 9.548949e-01 [501] 6.034167e+03 5.039247e+01 4.984740e+01 1.707115e+01 7.220290e+02 [506] 5.417017e+01 8.801766e+00 7.299364e-01 2.051052e+01 6.436147e+01 [511] 6.817713e+01 3.942027e+01 2.597114e+01 1.774695e+01 6.025092e+00 [516] 4.462797e+02 3.341356e+01 2.850145e+01 4.200709e+01 3.853616e+02 [521] 7.385462e+01 3.523484e+00 4.126339e+01 1.416076e+01 2.613886e+01 [526] 1.252595e+02 2.386162e+02 3.259752e+01 1.420408e+01 9.594025e+00 [531] 5.621066e+00 1.526531e+01 3.152829e+01 1.039462e+01 3.988317e+00 [536] 1.725614e+00 6.437558e+01 2.548963e+00 1.010938e+02 2.430677e+01 [541] 1.875309e-01 3.644641e+00 7.070394e+01 1.655039e+03 3.589073e+01 [546] 5.539879e+00 8.611326e+00 3.834475e+01 4.955155e+01 6.608420e+01 [551] 2.194384e+03 1.619770e+01 1.237363e+00 1.453725e+00 1.838755e+01 [556] 1.909812e+01 3.260261e+00 1.096903e+01 8.992346e+02 7.861727e+00 [561] 2.648284e+03 8.878385e+00 2.882547e+00 1.258862e+01 1.800375e+01 [566] 5.828785e+01 1.061388e+01 5.083550e+01 4.317430e+00 5.688948e+01 [571] 7.653510e+00 1.481634e+01 4.154252e+00 1.284084e+02 4.473938e+01 [576] 1.267885e+02 1.394353e+02 4.541629e+01 2.208160e+02 1.717882e+01 [581] 4.813298e+01 1.115016e+02 2.461636e+03 3.552135e+01 4.512945e+01 [586] 3.224178e+02 2.314199e+03 7.441584e+01 1.718150e+01 7.730894e+00 [591] 1.491609e+02 2.570497e+01 4.608783e+01 5.467350e+01 1.719758e+01 [596] 2.339394e+03 1.865676e+01 3.933709e+01 1.681017e+01 2.474953e+01 [601] 2.038647e+00 8.622968e+00 9.349561e-01 1.494945e+01 4.081990e+00 [606] 3.870486e+01 5.598392e+01 1.328566e+01 2.362921e+00 7.207151e+02 [611] 2.404093e+01 1.155983e+01 1.691743e+01 8.744722e+01 2.184190e+01 [616] 3.590592e+00 1.779586e+01 3.657236e+01 5.686361e-01 3.520894e+01 [621] 7.074108e+00 1.657094e+03 7.982109e-01 5.064677e+00 6.262093e+02 [626] 2.870515e+01 8.303758e+03 2.762700e+01 1.624640e+00 5.921134e+01 [631] 3.276042e+00 2.755666e+01 8.429071e+01 8.477740e+00 4.151988e+01 [636] 3.294984e+01 7.767805e+00 9.200134e+01 4.587483e+00 2.493035e+02 [641] 6.592578e+00 1.418503e+00 1.516791e+01 1.477287e+01 3.704645e+01 [646] 8.721305e+00 2.189291e+03 8.191802e+00 3.825986e+01 6.158122e+00 [651] 4.465405e+00 1.112642e+01 2.550888e+02 4.769829e+02 7.911194e-01 [656] 4.186181e+01 6.345145e+01 4.752984e+01 5.210523e+01 4.813126e+01 [661] 2.326664e+01 9.836598e-01 1.005972e+02 9.243633e+00 1.693193e+02 [666] 1.977896e+01 8.723914e+02 2.454294e+01 8.505447e+02 2.920461e+01 [671] 8.135723e+00 6.098300e-01 4.937127e+01 4.667080e+01 1.132762e+01 [676] 2.021363e+02 4.837541e+01 8.330242e+01 5.109837e+01 7.086361e+00 [681] 1.070431e+03 2.253453e+01 5.357319e+01 2.034128e+02 2.680907e+01 [686] 2.082578e+00 4.358905e-01 3.398105e+00 4.768456e+01 7.962809e+00 [691] 2.272725e+01 9.625162e+00 2.994760e+01 2.270480e+02 3.629022e+01 [696] 3.106106e+00 3.407364e+00 2.340090e+01 5.792378e+01 9.269931e+01 [701] 8.051592e+01 1.854167e+01 1.182170e+01 5.475539e+01 1.052476e+03 [706] 1.359185e+00 4.670906e+01 1.231770e+00 1.387123e+02 6.509167e+00 [711] 1.094845e+01 1.766438e+02 7.534465e+00 7.001628e+02 1.482143e+00 [716] 1.189867e+02 1.142132e+01 3.969170e+01 2.647721e+01 5.905119e+01 [721] 5.217631e+01 5.625584e+02 2.713808e+02 1.380951e+02 3.582926e+01 [726] 1.217259e+01 1.888729e+01 1.608852e+01 1.022077e+01 5.687990e+00 [731] 3.045977e+01 1.521110e+01 4.671596e+00 1.508738e+01 3.362849e+01 [736] 1.791857e+02 3.884469e+01 4.577196e+00 1.163813e+01 1.169593e+01 [741] 1.590407e+00 2.682489e+01 5.086659e+01 4.323861e+02 2.998765e+01 [746] 1.412907e+01 6.281651e+01 4.529248e+01 8.888791e+01 2.857319e+01 [751] 1.651180e+01 1.442846e+00 7.856340e+00 1.342881e+03 5.985258e+01 [756] 6.481658e+01 6.345736e+01 2.198211e+02 1.806692e+01 1.654965e+01 [761] 2.227622e+01 4.914569e+00 6.898792e+01 3.211385e+02 8.245563e+01 [766] 5.120474e+00 7.605570e+01 2.788613e+00 1.607510e+01 9.120824e+00 [771] 3.741119e+02 1.108389e+01 5.074355e+01 7.350055e+01 1.125730e+01 [776] 1.522540e+01 5.082086e+01 1.102920e+03 3.635717e+03 2.231924e+01 [781] 3.213401e+01 1.218229e+02 9.920556e+02 2.828775e+02 2.539100e+02 [786] 3.950088e+01 3.609173e+01 1.488012e+01 2.980202e+01 1.712972e+01 [791] 2.606150e+01 8.456681e+02 1.107403e+01 1.319336e+01 1.904563e+01 [796] 6.345379e+01 1.103090e+01 4.615653e+00 2.543709e+03 1.388515e+02 [801] 5.966949e+00 3.505461e+01 6.601499e+00 1.405929e+01 3.255605e+03 [806] 4.090023e+01 1.073340e+02 1.042158e+00 4.322291e+02 3.901416e+03 [811] 1.365471e+03 1.784239e+02 4.521865e+00 3.848364e+00 1.000524e+02 [816] 5.266322e+02 3.358601e+01 1.775482e+03 2.670645e+00 1.835728e+01 [821] 2.714096e+01 1.659378e+01 5.274773e+01 2.083232e+02 8.164395e+00 [826] 2.221224e+01 1.147865e+03 5.327564e+01 9.659809e+00 7.095614e+02 [831] 7.456669e+00 8.535633e+00 4.850388e+01 2.052778e+01 3.337394e+01 [836] 1.056309e+02 6.113570e+02 8.082344e+02 2.649005e+01 2.459421e+01 [841] 5.441385e+01 6.306201e+00 5.144326e+02 1.434452e+02 2.501009e+03 [846] 8.082255e+01 2.144788e+00 5.280628e+00 2.490645e+01 7.498498e+00 [851] 3.592747e+01 1.403750e+03 2.920938e+01 2.322363e+01 1.928410e+01 [856] 8.073215e+01 4.882149e+00 1.235104e+01 1.419739e+01 1.049393e+01 [861] 3.086542e+01 1.097193e+01 1.707247e+02 4.077078e+00 1.684567e+01 [866] 7.252723e+01 2.675662e+02 1.608234e+03 5.818914e+00 2.136754e+01 [871] 4.184882e+01 2.765468e+01 4.811521e+00 1.973192e+01 8.820572e+02 [876] 1.113403e+02 1.707781e+01 4.101013e+01 1.000420e+01 8.824282e+01 [881] 3.132175e+01 2.006091e+00 4.834129e+00 1.239695e+01 1.122761e+03 [886] 9.592099e+01 1.984687e+01 9.505125e+01 8.594741e+02 1.246146e+00 [891] 2.748681e+01 7.391627e+01 1.291077e+01 4.103934e+00 4.378285e+02 [896] 1.726710e+02 1.947486e+02 5.697171e+00 8.932555e-01 5.065850e+01 [901] 3.475932e+00 3.008331e+00 1.234760e+00 1.066036e+02 1.138437e+01 [906] 3.315324e+01 1.385647e+00 3.185063e+00 5.606821e-01 5.980065e+01 [911] 2.133715e+01 9.659963e+01 3.065999e+02 4.496987e+01 9.173046e+01 [916] 5.654136e+00 6.748829e+01 7.425704e+00 2.906498e+01 1.067510e+01 [921] 8.237936e+00 8.420145e+00 5.647139e+01 1.205118e+01 4.682776e+01 [926] 1.210546e+01 9.600530e+00 2.481966e+01 1.274411e+01 3.174840e+01 [931] 2.021779e+00 1.125853e+02 4.194707e+00 3.377161e+01 1.495028e-01 [936] 3.580019e-01 1.762504e+01 5.056806e+01 2.029355e+02 9.389441e+00 [941] 1.540601e+01 3.131130e+01 3.027188e+01 1.727118e+03 3.797137e+00 [946] 1.645149e+01 9.112509e+01 1.367046e+03 6.341065e+02 5.818832e+00 [951] 3.230614e+01 1.740642e+03 4.066555e+00 7.391655e+00 5.243520e+00 [956] 1.198822e+01 1.180793e+01 5.012309e+01 6.731854e+00 5.673616e+00 [961] 1.591551e+01 4.499119e+00 2.181338e+02 2.135720e+02 2.627566e+00 [966] 2.074161e+00 7.012194e+00 1.746757e+01 9.566916e+00 6.818406e+01 [971] 3.188648e+01 1.217066e+02 1.823184e+01 1.400848e+01 4.329180e+00 [976] 8.781575e+01 2.389950e+01 1.549799e+01 4.544346e+02 1.803696e+01 [981] 5.983288e+00 2.686368e+01 2.532056e+02 8.538412e+01 4.387176e+02 [986] 2.030361e+01 1.980926e+01 1.042166e+03 1.009552e+03 4.129851e+00 [991] 1.168747e+01 4.773220e+00 1.213882e+03 2.578756e+00 2.440299e+01 [996] 8.674346e+00 2.158236e+00 1.905446e+01 1.296495e+01 3.909330e+01 boutnt> ## 'rndproc2' is a random sample vector from the example boutnt> xbouts2 <- boutfreqs(rndprocs2, 5) # Bouts class result boutnt> (startval2 <- boutinit(xbouts2, 80)) [2.54,80] (80,948] a 4.069680e+03 1.350131e+03 lambda 3.938513e-02 4.387283e-03 boutnt> ## 3-process boutnt> ## 'rndproc3' is a random sample vector from the example boutnt> xbouts3 <- boutfreqs(rndprocs3, 5) boutnt> (startval3 <- boutinit(xbouts3, c(75, 220))) [2.55,75] (75,220] (220,8.3e+03] a 3.861946e+03 1.549852e+03 1.140873e+03 lambda 3.620585e-02 1.115144e-02 9.094169e-04 > > ## 2-process > opts0 <- list(method="L-BFGS-B", lower=c(-2, -5, -10)) > opts1 <- list(method="L-BFGS-B", lower=c(1e-1, 1e-3, 1e-6)) > bouts2.fit <- fitMLEbouts(xbouts2, start=startval2, optim_opts0=opts0, + optim_opts1=opts1) Error in mle(function (p, lambda0, lambda1) : 'start' must be a named list Calls: fitMLEbouts ... fitMLEbouts -> fitMLEbouts -> .local -> do.call -> mle Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... [156s] OK Running 'tinytest.R' [156s] ** running tests for arch 'x64' ... [182s] OK Running 'tinytest.R' [182s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [90s] OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs