* using log directory 'd:/Rcompile/CRANpkg/local/3.6/dvir.Rcheck' * using R version 3.6.3 (2020-02-29) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'dvir/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'dvir' version '2.0.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'dvir' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [8s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ERROR Running examples in 'dvir-Ex.R' failed The error most likely occurred in: > ### Name: Bmarginal > ### Title: Posterior pairing probabilities > ### Aliases: Bmarginal > > ### ** Examples > > > pm = example1$pm > am = example1$am > missing = example1$missing > jointRes = jointDVI(pm, am, missing) DVI problem: 3 victims: V1, V2, V3 3 missing: M1, M2, M3 1 families 1 typed refs: R1 Joint identification Undisputed matches: Pairwise LR threshold = 10000 Iteration 1: No undisputed matches Assignments to consider in the joint analysis: 27 Error in logliks.AM.new[compNo] <- vapply(changedComps, function(a) loglikTotal(a), : replacement has length zero Calls: jointDVI -> lapply -> FUN -> loglikAssign Execution halted * checking PDF version of manual ... OK * DONE Status: 1 ERROR