* using log directory 'd:/Rcompile/CRANpkg/local/3.6/parameters.Rcheck' * using R version 3.6.3 (2020-02-29) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'parameters/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'parameters' version '0.13.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'parameters' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [51s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [60s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [119s] ERROR Running 'spelling.R' [0s] Running 'testthat.R' [118s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(parameters) > if (length(strsplit(packageDescription("parameters")$Version, "\\.")[[1]]) > 3) { + Sys.setenv("RunAllparametersTests" = "yes") + } else { + Sys.setenv("RunAllparametersTests" = "no") + } > > osx <- tryCatch( + { + si <- Sys.info() + if (!is.null(si["sysname"])) { + si["sysname"] == "Darwin" || grepl("^darwin", R.version$os) + } else { + FALSE + } + }, + error = function(e) { + FALSE + } + ) > > if (!osx) { + test_check("parameters") + } Loading required package: lme4 Loading required package: Matrix Loading required package: GLMMadaptive Attaching package: 'GLMMadaptive' The following object is masked from 'package:lme4': negative.binomial Model has no zero-inflation component! Model has no zero-inflation component! Model has no zero-inflation component! Loading required package: MCMCglmm Loading required package: coda Loading required package: ape Loading required package: PMCMRplus Loading required package: betareg Loading required package: brglm2 Waiting for profiling to be done... Computing bootstrap confidence intervals ... 167 message(s): boundary (singular) fit: see ?isSingular Loading required package: insight Loading required package: survival Loading required package: bayestestR Loading required package: splines Loading required package: pscl Classes and Methods for R developed in the Political Science Computational Laboratory Department of Political Science Stanford University Simon Jackman hurdle and zeroinfl functions by Achim Zeileis Gu & Wahba 4 term additive model 4 term additive + random effectGu & Wahba 4 term additive model Maximum number of PQL iterations: 20 iteration 1 iteration 2 iteration 3 Loading required package: gee Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27 running glm to get initial regression estimate (Intercept) tensionM tensionH 36.38889 -10.00000 -14.72222 Loading required package: geepack Loading required package: AER Loading required package: car Loading required package: carData Loading required package: lmtest Loading required package: zoo Attaching package: 'zoo' The following objects are masked from 'package:base': as.Date, as.Date.numeric Loading required package: sandwich Loading required package: lavaan This is lavaan 0.6-8 lavaan is FREE software! Please report any bugs. Loading required package: mice Attaching package: 'mice' The following object is masked from 'package:stats': filter The following objects are masked from 'package:base': cbind, rbind Loading required package: logspline Multiple `BFBayesFactor` models detected - posteriors are extracted from the first numerator model. See help("get_parameters", package = "insight"). Multiple `BFBayesFactor` models detected - posteriors are extracted from the first numerator model. See help("get_parameters", package = "insight"). Contrasts set to contr.sum for the following variables: treatment, gender Loading required package: effectsize Loading required package: gam Loading required package: foreach Loaded gam 1.20 Attaching package: 'gam' The following objects are masked from 'package:mgcv': gam, gam.control, gam.fit, s Loading required package: blme Loading required package: cplm Attaching package: 'cplm' The following object is masked from 'package:nlme': VarCorr The following object is masked from 'package:lme4': VarCorr Loading required package: psych Attaching package: 'psych' The following object is masked from 'package:effectsize': phi The following object is masked from 'package:lavaan': cor2cov The following object is masked from 'package:car': logit The following object is masked from 'package:testthat': describe Loading required package: FactoMineR Loading required namespace: GPArotation Loading required package: multcomp Loading required package: mvtnorm Loading required package: TH.data Loading required package: MASS Attaching package: 'MASS' The following object is masked from 'package:GLMMadaptive': negative.binomial Attaching package: 'TH.data' The following object is masked from 'package:MASS': geyser Loading required package: boot Attaching package: 'boot' The following object is masked from 'package:psych': logit The following object is masked from 'package:car': logit The following object is masked from 'package:survival': aml Loading required package: mediation mediation: Causal Mediation Analysis Version: 4.5.0 Attaching package: 'mediation' The following object is masked from 'package:psych': mediate Loading required package: metafor Loading 'metafor' package (version 2.4-0). For an overview and introduction to the package please type: help(metafor). Attaching package: 'metafor' The following object is masked from 'package:cplm': ranef The following object is masked from 'package:car': vif Loading required package: mfx Loading required package: bbmle Loading required package: stats4 Loading required package: truncreg Loading required package: maxLik Loading required package: miscTools Attaching package: 'miscTools' The following object is masked from 'package:bbmle': stdEr Please cite the 'maxLik' package as: Henningsen, Arne and Toomet, Ott (2011). maxLik: A package for maximum likelihood estimation in R. Computational Statistics 26(3), 443-458. DOI 10.1007/s00180-010-0217-1. If you have questions, suggestions, or comments regarding the 'maxLik' package, please use a forum or 'tracker' at maxLik's R-Forge site: https://r-forge.r-project.org/projects/maxlik/ Loading required package: VGAM Attaching package: 'VGAM' The following object is masked from 'package:bbmle': AICc The following objects are masked from 'package:boot': logit, simplex The following objects are masked from 'package:psych': fisherz, logistic, logit The following object is masked from 'package:gam': s The following object is masked from 'package:AER': tobit The following object is masked from 'package:lmtest': lrtest The following object is masked from 'package:car': logit The following object is masked from 'package:mgcv': s The following object is masked from 'package:coda': nvar Loading required package: lmerTest Attaching package: 'lmerTest' The following object is masked from 'package:lme4': lmer The following object is masked from 'package:stats': step Loading required package: pbkrtest Loading required package: clubSandwich Loading required package: nFactors Loading required package: lattice Attaching package: 'lattice' The following object is masked from 'package:boot': melanoma Attaching package: 'nFactors' The following object is masked from 'package:lattice': parallel Loading required package: plm Attaching package: 'plm' The following objects are masked from 'package:VGAM': has.intercept, nobs The following object is masked from 'package:stats4': nobs The following objects are masked from 'package:cplm': fixef, ranef The following object is masked from 'package:lavaan': nobs Loading required package: WRS2 == Skipped tests =============================================================== * On CRAN (5) [ FAIL 0 | WARN 0 | SKIP 5 | PASS 449 ] > > proc.time() user system elapsed 115.72 2.21 118.26 runtime error R6031 - Attempt to initialize the CRT more than once. This indicates a bug in your application. * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [1s] OK * checking PDF version of manual ... OK * DONE Status: 1 ERROR