* using log directory 'd:/Rcompile/CRANpkg/local/3.6/seqgendiff.Rcheck'
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'seqgendiff/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'seqgendiff' version '1.2.2'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'seqgendiff' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [5s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... ERROR
Running examples in 'seqgendiff-Ex.R' failed
The error most likely occurred in:

> ### Name: thin_lib
> ### Title: Binomial thinning for altering library size.
> ### Aliases: thin_lib
> 
> ### ** Examples
> 
> ## Generate count data and thinning factors
> ## In practice, you would obtain mat from a real dataset, not simulate it.
> set.seed(1)
> n <- 10
> p <- 1000
> lambda <- 1000
> mat <- matrix(lambda, ncol = n, nrow = p)
> thinlog2 <- rexp(n = n, rate = 1)
> 
> ## Thin library sizes
> thout <- thin_lib(mat = mat, thinlog2 = thinlog2)
> 
> ## Compare empirical thinning proportions to specified thinning proportions
> empirical_propvec <- colMeans(thout$mat) / lambda
> specified_propvec <- 2 ^ (-thinlog2)
> empirical_propvec
 [1] 0.593540 0.440856 0.904004 0.907761 0.739050 0.134163 0.426668 0.688737
 [9] 0.515567 0.903628
> specified_propvec
 [1] 0.5924717 0.4408492 0.9039365 0.9076480 0.7391461 0.1344397 0.4264469
 [8] 0.6879221 0.5152814 0.9030977
> 
> 
> 
> 
> ### * <FOOTER>
> ###
> cleanEx()
> options(digits = 7L)
> base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
Time elapsed:  6.88 0.23 7.22 NA NA 
> grDevices::dev.off()
null device 
          1 
> ###
> ### Local variables: ***
> ### mode: outline-minor ***
> ### outline-regexp: "\\(> \\)?### [*]+" ***
> ### End: ***
> quit('no')

runtime error R6031
- Attempt to initialize the CRT more than once.
This indicates a bug in your application.
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [46s] ERROR
  Running 'testthat.R' [45s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(seqgendiff)
  > 
  > test_check("seqgendiff")
  == Skipped tests ===============================================================
  * empty test (2)
  
  [ FAIL 0 | WARN 0 | SKIP 2 | PASS 63 ]
  > 
  > proc.time()
     user  system elapsed 
    43.07    1.18   45.05 
  
  runtime error R6031
  - Attempt to initialize the CRT more than once.
  This indicates a bug in your application.
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking re-building of vignette outputs ... [105s] OK
* checking PDF version of manual ... OK
* DONE
Status: 2 ERRORs