* using log directory 'd:/Rcompile/CRANpkg/local/4.0/kinship2.Rcheck' * using R version 4.0.5 (2021-03-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'kinship2/DESCRIPTION' ... OK * this is package 'kinship2' version '1.8.5' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'kinship2' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [19s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in Makefiles ... OK * checking for GNU extensions in Makefiles ... OK * checking include directives in Makefiles ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [7s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [26s] OK Running 'failure.R' [3s] Comparing 'failure.Rout' to 'failure.Rout.save' ... OK Running 'makefam.R' [3s] Comparing 'makefam.Rout' to 'makefam.Rout.save' ... OK Running 'monozygote.R' [3s] Comparing 'monozygote.Rout' to 'monozygote.Rout.save' ... OK Running 'subscript.R' [3s] Comparing 'subscript.Rout' to 'subscript.Rout.save' ... OK Running 'test.fixParents.R' [3s] Running 'test.kinX.R' [3s] Comparing 'test.kinX.Rout' to 'test.kinX.Rout.save' ... OK Running 'test.pedigree.shrink.R' [3s] Comparing 'test.pedigree.shrink.Rout' to 'test.pedigree.shrink.Rout.save' ...159,161d158 < Warning message: < In options(stringsAsFactors = TRUE) : < 'options(stringsAsFactors = TRUE)' is deprecated and will be disabled Running 'test.pedigree.unrelated.R' [3s] Comparing 'test.pedigree.unrelated.Rout' to 'test.pedigree.unrelated.Rout.save' ... OK Running 'twin.R' [3s] Comparing 'twin.Rout' to 'twin.Rout.save' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [1s] OK * checking PDF version of manual ... OK * DONE Status: OK