* using log directory 'd:/Rcompile/CRANpkg/local/4.3/stars.Rcheck' * using R Under development (unstable) (2022-08-11 r82713 ucrt) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: UTF-8 * checking for file 'stars/DESCRIPTION' ... OK * this is package 'stars' version '0.5-6' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'stars' can be installed ... OK * checking installed package size ... NOTE installed size is 5.4Mb sub-directories of 1Mb or more: doc 1.7Mb nc 1.7Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [30s] OK * checking Rd files ... [2s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [64s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [310s] OK Running 'aggregate.R' [5s] Comparing 'aggregate.Rout' to 'aggregate.Rout.save' ...4c4 < Linking to GEOS 3.9.1, GDAL 3.4.3, PROJ 7.2.1; sf_use_s2() is TRUE --- > Linking to GEOS 3.10.2, GDAL 3.4.3, PROJ 8.2.0; sf_use_s2() is TRUE Running 'align.R' [5s] Comparing 'align.Rout' to 'align.Rout.save' ... OK Running 'area.R' [26s] Comparing 'area.Rout' to 'area.Rout.save' ...52,64d51 < /PRODUCT/longitude, < /PRODUCT/latitude, < /PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column, < stars object with 2 dimensions and 1 attribute < attribute(s): < Min. 1st Qu. Median Mean 3rd Qu. Max. < area [m^2] 25983110 28008871 35690854 42912281 54562137 100943458 < dimension(s): < from to offset delta refsys point values x/y < x 1 450 NA NA WGS 84 NA [450x278] -5.81066 [°],...,30.9468 [°] [x] < y 1 278 NA NA WGS 84 NA [450x278] 28.3605 [°],...,51.4686 [°] [y] < curvilinear grid < There were 15 warnings (use warnings() to see them) Running 'crop.R' [6s] Comparing 'crop.Rout' to 'crop.Rout.save' ... OK Running 'curvilinear.R' [28s] Comparing 'curvilinear.Rout' to 'curvilinear.Rout.save' ...55,88d54 < /PRODUCT/longitude, < /PRODUCT/latitude, < /PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column, < stars object with 3 dimensions and 1 attribute < attribute(s): < Min. 1st Qu. Median < nitrogendioxide_summed_total_c... 3.650813e-05 7.451281e-05 8.296968e-05 < Mean 3rd Qu. Max. NA's < nitrogendioxide_summed_total_c... 8.581399e-05 9.397442e-05 0.0004535302 330 < dimension(s): < from to offset delta refsys point values < x 1 450 NA NA WGS 84 NA [450x278] -5.81066 [°],...,30.9468 [°] < y 1 278 NA NA WGS 84 NA [450x278] 28.3605 [°],...,51.4686 [°] < time 1 1 NA NA NA NA NULL < x/y < x [x] < y [y] < time < curvilinear grid < stars object with 3 dimensions and 1 attribute < attribute(s): < Min. 1st Qu. Median < nitrogendioxide_summed_total_c... 4.383528e-05 7.480038e-05 8.344652e-05 < Mean 3rd Qu. Max. NA's < nitrogendioxide_summed_total_c... 8.607374e-05 9.398567e-05 0.000192237 32 < dimension(s): < from to offset delta refsys point values x/y < x 1 50 NA NA WGS 84 NA [50x31] -5.81066 [°],...,30.1405 [°] [x] < y 1 31 NA NA WGS 84 NA [50x31] 28.7828 [°],...,51.4686 [°] [y] < time 1 1 NA NA NA NA NULL < curvilinear grid < null device < 1 < There were 15 warnings (use warnings() to see them) Running 'datasets.R' [3s] Comparing 'datasets.Rout' to 'datasets.Rout.save' ...30,38d29 < stars_proxy object with 1 attribute in 1 file(s): < $`MTD_MSIL1C.xml:10m:EPSG_32632` < [1] "[...]/MTD_MSIL1C.xml:10m:EPSG_32632" < < dimension(s): < from to offset delta refsys point values x/y < x 1 10980 3e+05 10 WGS 84 / UTM zone 32N NA NULL [x] < y 1 10980 6e+06 -10 WGS 84 / UTM zone 32N NA NULL [y] < band 1 4 NA NA NA NA B4,...,B8 Running 'dimensions.R' [4s] Comparing 'dimensions.Rout' to 'dimensions.Rout.save' ... OK Running 'extract.R' [3s] Comparing 'extract.Rout' to 'extract.Rout.save' ... OK Running 'gridtypes.R' [3s] Comparing 'gridtypes.Rout' to 'gridtypes.Rout.save' ... OK Running 'nc.R' [4s] Comparing 'nc.Rout' to 'nc.Rout.save' ... OK Running 'plot.R' [7s] Comparing 'plot.Rout' to 'plot.Rout.save' ... OK Running 'predict.R' [8s] Comparing 'predict.Rout' to 'predict.Rout.save' ... OK Running 'proxy.R' [48s] Comparing 'proxy.Rout' to 'proxy.Rout.save' ...267,345d266 < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < stars_proxy object with 2 attributes in 18 file(s): < $sst < [1] "[...]/avhrr-only-v2.19810901.nc:sst" "[...]/avhrr-only-v2.19810902.nc:sst" < [3] "[...]/avhrr-only-v2.19810903.nc:sst" "[...]/avhrr-only-v2.19810904.nc:sst" < [5] "[...]/avhrr-only-v2.19810905.nc:sst" "[...]/avhrr-only-v2.19810906.nc:sst" < [7] "[...]/avhrr-only-v2.19810907.nc:sst" "[...]/avhrr-only-v2.19810908.nc:sst" < [9] "[...]/avhrr-only-v2.19810909.nc:sst" < < $anom < [1] "[...]/avhrr-only-v2.19810901.nc:anom" < [2] "[...]/avhrr-only-v2.19810902.nc:anom" < [3] "[...]/avhrr-only-v2.19810903.nc:anom" < [4] "[...]/avhrr-only-v2.19810904.nc:anom" < [5] "[...]/avhrr-only-v2.19810905.nc:anom" < [6] "[...]/avhrr-only-v2.19810906.nc:anom" < [7] "[...]/avhrr-only-v2.19810907.nc:anom" < [8] "[...]/avhrr-only-v2.19810908.nc:anom" < [9] "[...]/avhrr-only-v2.19810909.nc:anom" < < dimension(s): < from to offset delta refsys point values x/y < x 1 1440 0 0.25 NA NA NULL [x] < y 1 720 90 -0.25 NA NA NULL [y] < zlev 1 1 0 [m] NA NA NA NULL < time 1 9 1981-09-01 UTC 1 days POSIXct NA NULL < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < stars object with 4 dimensions and 2 attributes < attribute(s), summary of first 1e+05 cells: < Min. 1st Qu. Median Mean 3rd Qu. Max. NA's < sst [C*°] -1.80 -1.19 -1.05 -0.3201670 -0.20 9.36 13360 < anom [C*°] -4.69 -0.06 0.52 0.2299385 0.71 3.70 13360 < dimension(s): < from to offset delta refsys point values x/y < x 1 1440 0 0.25 NA NA NULL [x] < y 1 720 90 -0.25 NA NA NULL [y] < zlev 1 1 0 [m] NA NA NA NULL < time 1 9 1981-09-01 UTC 1 days POSIXct NA NULL < stars object with 5 dimensions and 1 attribute < attribute(s), summary of first 1e+05 cells: < Min. 1st Qu. Median Mean 3rd Qu. Max. NA's < sst.anom [C*°] -1.8 -1.19 -1.05 -0.320167 -0.2 9.36 13360 < dimension(s): < from to offset delta refsys point values x/y < x 1 1440 0 0.25 NA NA NULL [x] < y 1 720 90 -0.25 NA NA NULL [y] < zlev 1 1 0 [m] NA NA NA NULL < time 1 9 1981-09-01 UTC 1 days POSIXct NA NULL < new_dim 1 2 NA NA NA NA sst , anom < Error in c.stars_proxy(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + : < for proxy objects, along argument as list is not implemented < stars_proxy object with 1 attribute in 2 file(s): < $sst.anom < [1] "[...]/avhrr-only-v2.19810901.nc:sst" < [2] "[...]/avhrr-only-v2.19810901.nc:anom" < < dimension(s): < from to offset delta refsys point values x/y < x 1 1440 0 0.25 NA NA NULL [x] < y 1 720 90 -0.25 NA NA NULL [y] < zlev 1 1 0 [m] NA NA NA NULL < time 1 1 1981-09-01 UTC NA POSIXct NA NULL < times 1 2 1981-09-01 1 days Date NA NULL Running 'raster.R' [16s] Comparing 'raster.Rout' to 'raster.Rout.save' ...24c24 < terra 1.6.7 --- > terra 1.5.34 83,110d82 < [1] TRUE < [1] TRUE < stars object with 3 dimensions and 1 attribute < attribute(s): < lyr.1.lyr.2 < c1:34 < c2:32 < c3:34 < x1:28 < x2:37 < x3:35 < dimension(s): < from to offset delta refsys point values x/y < x 1 10 -180 36 WGS 84 NA NULL [x] < y 1 10 90 -18 WGS 84 NA NULL [y] < new_dim 1 2 NA NA NA NA lyr.1, lyr.2 < [[1]] < IDs categories < 1 1 c1 < 2 2 c2 < 3 3 c3 < < [[2]] < IDs categories < 1 0 x1 < 2 2 x2 < 3 3 x3 < Running 'rasterize.R' [5s] Comparing 'rasterize.Rout' to 'rasterize.Rout.save' ... OK Running 'rectilinear.R' [4s] Comparing 'rectilinear.Rout' to 'rectilinear.Rout.save' ... OK Running 'redimension.R' [17s] Comparing 'redimension.Rout' to 'redimension.Rout.save' ... OK Running 'sf.R' [5s] Comparing 'sf.Rout' to 'sf.Rout.save' ... OK Running 'sp.R' [4s] Comparing 'sp.Rout' to 'sp.Rout.save' ... OK Running 'spacetime.R' [4s] Comparing 'spacetime.Rout' to 'spacetime.Rout.save' ... OK Running 'spatstat.R' [6s] Comparing 'spatstat.Rout' to 'spatstat.Rout.save' ... OK Running 'stars.R' [25s] Comparing 'stars.Rout' to 'stars.Rout.save' ...212c212 < 4 1841005 1143985 --- > 4 1841004 1143985 216c216 < 8 1841011 1143965 --- > 8 1841010 1143965 412,441d411 < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < sst, anom, < stars object with 4 dimensions and 2 attributes < attribute(s), summary of first 1e+05 cells: < Min. 1st Qu. Median Mean 3rd Qu. Max. NA's < sst [C*°] -1.80 -1.19 -1.05 -0.3201670 -0.20 9.36 13360 < anom [C*°] -4.69 -0.06 0.52 0.2299385 0.71 3.70 13360 < dimension(s): < from to offset delta refsys point values x/y < x 1 1440 0 0.25 NA NA NULL [x] < y 1 720 90 -0.25 NA NA NULL [y] < zlev 1 1 0 [m] NA NA NA NULL < time 1 9 1981-09-01 UTC 1 days POSIXct NA NULL < stars object with 3 dimensions and 2 attributes < attribute(s), summary of first 1e+05 cells: < Min. 1st Qu. Median Mean 3rd Qu. Max. NA's < sst [C*°] -1.80 -1.19 -1.05 -0.3201670 -0.20 9.36 13360 < anom [C*°] -4.69 -0.06 0.52 0.2299385 0.71 3.70 13360 < dimension(s): < from to offset delta refsys point values x/y < x 1 1440 0 0.25 NA NA NULL [x] < y 1 720 90 -0.25 NA NA NULL [y] < times 1 3 1981-09-01 1 days Date NA NULL Running 'subset.R' [4s] Comparing 'subset.Rout' to 'subset.Rout.save' ... OK Running 'testthat.R' [54s] Comparing 'testthat.Rout' to 'testthat.Rout.save' ... OK Running 'tidy.R' [4s] Comparing 'tidy.Rout' to 'tidy.Rout.save' ... OK Running 'transform.R' [3s] Comparing 'transform.Rout' to 'transform.Rout.save' ... OK Running 'warp.R' [3s] Comparing 'warp.Rout' to 'warp.Rout.save' ... OK Running 'write.R' [4s] Comparing 'write.Rout' to 'write.Rout.save' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [149s] OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE