CRAN Package Check Results for Maintainer ‘Jiehuan Sun <jiehuan.sun at yale.edu>’

Last updated on 2022-08-15 08:50:26 CEST.

Package ERROR NOTE
BCSub 13
LCox 9 4

Package BCSub

Current CRAN status: NOTE: 13

Version: 0.5
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Package LCox

Current CRAN status: ERROR: 9, NOTE: 4

Version: 0.1.0
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.0
Check: examples
Result: ERROR
    Running examples in 'LCox-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: LCox
    > ### Title: Hypothesis Testing for longitudinal gene profiles and the
    > ### survival outcome.
    > ### Aliases: LCox
    >
    > ### ** Examples
    >
    > data.list = simudata()
    > data = data.list$data
    > data.id = data.list$data.id
    > res = LCox(data = data, data.id = data.id, geneID = 3:4)
    > res = LCox(data = data, data.id = data.id, geneID = 3:4, varID = 4)
    Error in `[.data.frame`(xx, "P(>|Chi|)") : undefined columns selected
    Calls: LCox -> sapply -> lapply -> FUN -> [ -> [.data.frame
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.0
Check: examples
Result: ERROR
    Running examples in ‘LCox-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: LCox
    > ### Title: Hypothesis Testing for longitudinal gene profiles and the
    > ### survival outcome.
    > ### Aliases: LCox
    >
    > ### ** Examples
    >
    > data.list = simudata()
    > data = data.list$data
    > data.id = data.list$data.id
    > res = LCox(data = data, data.id = data.id, geneID = 3:4)
    > res = LCox(data = data, data.id = data.id, geneID = 3:4, varID = 4)
    Error in `[.data.frame`(xx, "P(>|Chi|)") : undefined columns selected
    Calls: LCox -> sapply -> lapply -> FUN -> [ -> [.data.frame
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-ix86+x86_64