CRAN Package Check Results for Maintainer Robrecht Cannoodt <rcannood at gmail.com>

CRAN Package Check Results for Maintainer ‘Robrecht Cannoodt <rcannood at gmail.com>’

Last updated on 2022-08-15 08:50:33 CEST.

Package	ERROR	NOTE	OK
anndata		4	9
babelwhale			13
diffusionMap			13
dyndimred		13
dynfeature		6	7
dyngen	1	1	11
dynparam		13
dynplot			13
dynutils			13
dynwrap		2	11
GillespieSSA			13
GillespieSSA2		4	9
lmds		13
princurve			13
qsub			13
SCORPIUS			13

Package anndata

Current CRAN status: NOTE: 4, OK: 9

Version: 0.7.5.3
Check: HTML version of manual
Result: NOTE
    Found the following HTML validation problems:
    AnnData.html:1390:1: Warning: <a> anchor "method-new" already defined
    AnnData.html:1419:1: Warning: <a> anchor "method-copy" already defined
    AnnData.html:1501:1: Warning: <a> anchor "method-print" already defined
    AnnData.html:1571:1: Warning: <a> anchor "method-.set_py_object" already defined
    AnnData.html:1600:1: Warning: <a> anchor "method-.get_py_object" already defined
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package babelwhale

Current CRAN status: OK: 13

Package diffusionMap

Current CRAN status: OK: 13

Package dyndimred

Current CRAN status: NOTE: 13

Version: 1.0.4
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'lle'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.4
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Package dynfeature

Current CRAN status: NOTE: 6, OK: 7

Version: 1.0.0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘magrittr’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package dyngen

Current CRAN status: ERROR: 1, NOTE: 1, OK: 11

Version: 1.0.3
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'SingleCellExperiment', 'SummarizedExperiment'
Flavor: r-release-macos-arm64

Version: 1.0.3
Check: tests
Result: ERROR
     Running ‘testthat.R’ [15s/17s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     >
     > test_check("dyngen")
     Loading required package: dyngen
     R(38878,0x7fffb5b67380) malloc: *** error for object 0x7fa89b539fb8: incorrect checksum for freed object - object was probably modified after being freed.
     *** set a breakpoint in malloc_error_break to debug
Flavor: r-oldrel-macos-x86_64

Package dynparam

Current CRAN status: NOTE: 13

Version: 1.0.2
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Package dynplot

Current CRAN status: OK: 13

Package dynutils

Current CRAN status: OK: 13

Package dynwrap

Current CRAN status: NOTE: 2, OK: 11

Version: 1.2.2
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘hdf5r’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package GillespieSSA

Current CRAN status: OK: 13

Package GillespieSSA2

Current CRAN status: NOTE: 4, OK: 9

Version: 0.2.8
Check: installed package size
Result: NOTE
     installed size is 5.5Mb
     sub-directories of 1Mb or more:
     doc 1.6Mb
     libs 3.3Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package lmds

Current CRAN status: NOTE: 13

Version: 0.1.0
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘Matrix’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package princurve

Current CRAN status: OK: 13

Package qsub

Current CRAN status: OK: 13

Package SCORPIUS

Current CRAN status: OK: 13